Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1695 ATGGACACGGACGGCGTCGTTTCCTTCGATGTCTCGCCGGAGGATTCCCACGAGGTTCATGTCTTGGCCGTCGATGACAGCCTCATCGATCGAAAGATCATCGAACGCTTGCTCAAAATCTCAGCGTGTAAAGTTACGGCTGTGGATAGTGGAATCAGAGCGCTGCAATTCCTGGGGCTGGATGAGCACAGAAGGACCTCTGAATCTGATGGTTTTGTCCCGGGTTTGAAGGTGGATCTAATTATAACAGACTACTGCATGCCCGAAATGACCGGTTACGAGTTGCTCAAGAAAATCAAGGAATCGTCCACTTTCAGAGAAATTCCTGTAGTGATTATGTCTTCCGAAAACATTTTGCCGCGCATAGACAGATGCTTGGAGGAAGGTGCGGAGGATTTCATAGTGAAGCCAGTGAAATTATCCGACGTGAAACGGTTAAAGGGTTACATGACGACGAGAGAGGTTAAGTCGGGAAGCCAAGACAGAAGAAGCGGCGGCGGCGGTGGTGTGGAgataaacaacaaaaggaagcTGCAAGAGCAAGACACCTCTGACGTGTCATCATCACCACCGTCCATTTCTACACTTTCATCATCACCACCGTCCGTTTCTTCACCATCACCGTCATCTTCTCCCACTTCTTCACCCGGCGTGCTTGCTTCTCCAATCAGACGGCTTAAAATGACCAGCACCGATTGA 699 0.485 MDTDGVVSFDVSPEDSHEVHVLAVDDSLIDRKIIERLLKISACKVTAVDSGIRALQFLGLDEHRRTSESDGFVPGLKVDLIITDYCMPEMTGYELLKKIKESSTFREIPVVIMSSENILPRIDRCLEEGAEDFIVKPVKLSDVKRLKGYMTTREVKSGSQDRRSGGGGGVEINNKRKLQEQDTSDVSSSPPSISTLSSSPPSVSSPSPSSSPTSSPGVLASPIRRLKMTSTD 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1695 232 Gene3D - 19 195 - -
Ssu2g1695 232 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-RELATED 8 231 - -
Ssu2g1695 232 ProSiteProfiles Response regulatory domain profile. 20 151 IPR001789 GO:0000160
Ssu2g1695 232 Pfam Response regulator receiver domain 21 143 IPR001789 GO:0000160
Ssu2g1695 232 PANTHER TWO-COMPONENT RESPONSE REGULATOR 8 231 IPR045279 GO:0009736
Ssu2g1695 232 MobiDBLite consensus disorder prediction 154 232 - -
Ssu2g1695 232 CDD REC_typeA_ARR 21 146 - -
Ssu2g1695 232 MobiDBLite consensus disorder prediction 183 218 - -
Ssu2g1695 232 SMART REC_2 19 150 IPR001789 GO:0000160
Ssu2g1695 232 SUPERFAMILY CheY-like 19 145 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1695 Ssu-Chr2 66237196 66238454 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1695 5 224 Response Regulator Gene Family AT1G59940 54.825 1.03e-73 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Ssu2g1695 Response_reg 9.2e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1695 K14492 - gmx:100779833 337.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1695 2 66237196 66238454 Ssu2g1695 2 66237196 66238454 ECH
Ssu2g1695 2 66237196 66238454 Ssu5g1010 5 32062404 32063538 PCT