Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1694 ATGATGCTTCTTCTTGTGAgcctttttgttttacatagttTGTTAATACCAACATGCTATTGCCAAACCACTACTCTTCAGAACATTGAAACTTTCTATCCAATCCAAACTCCAGAACAACCTCTCTCAATCCAGCCTCTTGAGCCACCACCAAAGCCACAAGCATCACCATCATCCCCAGGACCAGTGGCTGCGTCAAAGACTTCGTCATCAAGCAGTAAGATAGTAACAGCGGTGGCTACAACTGTAGCAACTACTCTAGTTATTTCTGGTTTGATTTTCGTCTTGGTTCAAAGGTGCTTCAGAGCAAGGAGGAGAAAGAAGATAACAAACATTGCTTCTGCTGTAGATAGGCGTGTTGTGCCTCAGGTAAACGTGTTTGAGAGAATAGAAGGAAACGTTAAAGCATTGATTGTTGATGAGGATGGTTTGGATGTGGTTTATTGGAGAAAGCTTGAAGGTAAAAGCTTAGCAGACAAGGATTTCCAAAAGGAGGTCTTGCATAGCCCCAAGGACAAAGGAGAAGATGATCATGAGGGGAATCAAGGGAAAAGATCTGAGTCCATTCAAGAAATGCCTCTTCTTAGAGAGAGATCTTCGACTTCCCTCATGAATATATTTCTTCCAGAGGAGTCATATACTATCATGAGAATCACACCTCCTAGTCCTCCTCCCACTGCTCTTTCATCAGTGGAAGGCTCCCCTAGGACCCCTACAGAATCATTTTCTCCACCCTTTCCCCCTTTATCACCAAAACCACTCTCCACTTCTTTCTCATCAATTCCAAAAATGACAAATCCTTCACCACCTACTCCCCCTCCAACTATACCTGACAGAAAGAATCAAGCACCAGCACCACCTTCCCCTCCTCCAATCCTATTTAGAGAGACCCCAGCACCCCCACCTCCTCCACCACCAATCCCAGGTAAACAAAGCTCAACACCATCACCGCCAATCCTAAATAAAAAGAACTCAGCAGCAGCACCATCTCCTCCACCAATTCCTCCTAGGAAGAGTCCAgcaccacctcctcctccaccaaAGGCAGGTGGTTTGAAGTCATCATCAAAACCACCACCTACCCCTATTGAAAGTACACCAGGTACCACAAGTAAGCAAGGCAACACTTCAGCTGAGGTAAAACTGAAGCCATTACATTGGGATAAGGTGAATACCAATCTTGATCACTCTATGGTGTGGGACAAAATTGACCGTGGCTCTTTCAGGGTTGATGATGATCTTATGGAAGCTCTCTTTGGGTGCGTTGCCACCAGCCAAAATGATAATACCCCAAAAGCAAATAACTCAATGAGTCCTAGCAGGGCTGCTTTGGCTCCATCAGCAAATGTTTTCCTTCTTGACCCCAGAAAATCACAAAACATTGCTATTGTTTTGAAATCTCTGGCAGTCTCACGTACAGAAATTATTGAAGCACTCATTGATGGTCAAGGCCTTAACACAGATACCATTGAAAAGCTTGGTAGAGTAGCCCCAACAGAAGAAGAGCAGTCACTTATACTTGCATACGAAGGAGACCCTTCAAAACTTGCTGCAGCTGAATCTTTCCTACATCACATCCTCAAAGCCGTTCCTTCAGCATTTAAGCGCTTGAATGCCTTGCTATTCAGGTTGAATTATGACTCAGAGATTGTAGAAATCAAGGAGTTTCTGCAGACCCTTGAGCTGGGGTGCAAGGAGCTTCGAACCCAAGGAATGTTTGTGAAGCTTCTTGAAGCAGTGCTTAAGGCTGGAAATCGCATGAATGCAGGCACTCATAGGGGTAATGCTCAAGCTTTCAACTTGGCTTCTCTGAGAAAGCTCTCCGATGTCAAGAGCACTGATGGAAAAACCACATTGCTTCACTTTGTGGTTGAAGAAGTAGTTCGTTCTGAAGGAAAACGTGCTGTTCTTAACCGTGATTGCAGTTTGAGTCGTAGTAGCAGTAAGAGCAGCAACAAAAGTGGAAACTATCAGAACTCTACTGCTTCAAATgaacaaagagaaagagaatataTAACGCTAGGATTGCCTGTTGTAGGAGGGATTAGTTCTGAGTTTTCCAACGTAAAGAAAGCTGCGGTTACAAATTACAATAGTTTTGTTGGTTCAATCTCATCACTCTCAGCCAGGATAGTTGAGATTAGAGAACTTGTTTCCCAGTGTGGAAATGACAAGGGAGGAAACTTTGTGAGAGAAATGAGCCATTTTCTTGAAAATGCTAAGGAGGAACTGAGATTAGTGAGGGAAGAGCAAACAAAGGTAATGCAACTTGTGAGAAGAACAACAAATTATTATCAAGGAGGAGCTTCAAAAGATGGTGCAGAACAccctctttatttatttgtcatagtTAAGGATTTTCTGGGAATGGTTGATCAAGCATGTATTGAGATTGCTCGTAACATGCAGAAGAGGAAGACACCAAGGTAA 2430 0.4202 MMLLLVSLFVLHSLLIPTCYCQTTTLQNIETFYPIQTPEQPLSIQPLEPPPKPQASPSSPGPVAASKTSSSSSKIVTAVATTVATTLVISGLIFVLVQRCFRARRRKKITNIASAVDRRVVPQVNVFERIEGNVKALIVDEDGLDVVYWRKLEGKSLADKDFQKEVLHSPKDKGEDDHEGNQGKRSESIQEMPLLRERSSTSLMNIFLPEESYTIMRITPPSPPPTALSSVEGSPRTPTESFSPPFPPLSPKPLSTSFSSIPKMTNPSPPTPPPTIPDRKNQAPAPPSPPPILFRETPAPPPPPPPIPGKQSSTPSPPILNKKNSAAAPSPPPIPPRKSPAPPPPPPKAGGLKSSSKPPPTPIESTPGTTSKQGNTSAEVKLKPLHWDKVNTNLDHSMVWDKIDRGSFRVDDDLMEALFGCVATSQNDNTPKANNSMSPSRAALAPSANVFLLDPRKSQNIAIVLKSLAVSRTEIIEALIDGQGLNTDTIEKLGRVAPTEEEQSLILAYEGDPSKLAAAESFLHHILKAVPSAFKRLNALLFRLNYDSEIVEIKEFLQTLELGCKELRTQGMFVKLLEAVLKAGNRMNAGTHRGNAQAFNLASLRKLSDVKSTDGKTTLLHFVVEEVVRSEGKRAVLNRDCSLSRSSSKSSNKSGNYQNSTASNEQREREYITLGLPVVGGISSEFSNVKKAAVTNYNSFVGSISSLSARIVEIRELVSQCGNDKGGNFVREMSHFLENAKEELRLVREEQTKVMQLVRRTTNYYQGGASKDGAEHPLYLFVIVKDFLGMVDQACIEIARNMQKRKTPR 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1694 809 MobiDBLite consensus disorder prediction 328 353 - -
Ssu2g1694 809 MobiDBLite consensus disorder prediction 265 313 - -
Ssu2g1694 809 SUPERFAMILY Formin homology 2 domain (FH2 domain) 450 806 - -
Ssu2g1694 809 MobiDBLite consensus disorder prediction 217 383 - -
Ssu2g1694 809 MobiDBLite consensus disorder prediction 43 68 - -
Ssu2g1694 809 MobiDBLite consensus disorder prediction 163 196 - -
Ssu2g1694 809 PANTHER FORMIN-RELATED 4 325 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Ssu2g1694 809 PANTHER FORMIN-RELATED 317 808 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Ssu2g1694 809 SMART it6_source 372 806 IPR015425 -
Ssu2g1694 809 Coils Coil 730 757 - -
Ssu2g1694 809 ProSiteProfiles Formin homology-2 (FH2) domain profile. 372 809 IPR015425 -
Ssu2g1694 809 Gene3D Formin, FH2 domain 393 809 IPR042201 -
Ssu2g1694 809 PANTHER FORMIN-LIKE PROTEIN 4 317 808 - -
Ssu2g1694 809 Pfam Formin Homology 2 Domain 378 791 IPR015425 -
Ssu2g1694 809 PANTHER FORMIN-LIKE PROTEIN 4 4 325 - -
Ssu2g1694 809 MobiDBLite consensus disorder prediction 644 666 - -
Ssu2g1694 809 MobiDBLite consensus disorder prediction 43 58 - -
Ssu2g1694 809 MobiDBLite consensus disorder prediction 163 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1694 Ssu-Chr2 66206596 66209111 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1694 348 807 FH2 protein (formin) Gene Family AT1G70140 58.009 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1694 - - gmx:100780368 1063.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1694 2 66206596 66209111 Ssu5g1007 5 31932371 31934850 PCT