Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1669 ATGTCTCTCAGTCCCACTCCCTCCCTCGCCATTCTGCTCCTACTCTTCCTCTTTTCCACACCCACCACCACTCAAACCTGCTCTTCCACCCCAACCACACACGCACACCCCTGCCCTCCCTTCCACTCCATCCCCGCCTTCCCATTCTCCTCCTCCCCAGGCTGCGGCCACCCCTCCTTCCAACTAACCTGCGCCACCCCCCACTCCCTCATCTCCATCAACAACCTCTCCTTCTCCATCCTCTCCTACAACCCCAACACCTCCTCCATCATCCTCTCCCCTCACCACCCCCACGCCACCACCAACTGCCCCACCTTCCCCTCCATCCCCCTCCGCCCCATCAACCTCTCCGCCTCCCCCTTCCACGTCTCCGCCGCCACGTGCTCCCGCCTCTCCTTCCTCCGCCCCTGCTACCCCCCTTCCCTCCCCAACTGCTCCCAATGCCCCTGGCAATGCCACCTCATCAAAAACCCCACACACCTCCTCCACGACTGCAGATCCACCCACCACTCCCCCTCCGACACCGACCAGTCCTGCCAGACCGACCTCCTCGGCTTCCTCGACGAAATCCTCCAAGCTGGAATCCGACTCGACTGGGACGAAACGCGTGACCCTTACTTCTCCAACTGCACCGACTGCCGCACAAGTAACGGACTCTGCGGCTTCAATTCATCGCACCCGGAGAAACCCTTCCTCTGCTTCCGCTTCCACTCCGAATCCACACTCTCCCCCCCGTGGATTCGCAAAATCAAGCCAAACAAAATGGCCGTTCTCAGCATCGTCGTCGCGTTGACCTCCTTGCTCCTTCTGGTTTCAGTCACCACCGCCATTCTCCGTTCCTCGAAATTAAAATCACCGTCATCAACACAGCAACAGCAAGATCCCACCGCGCTCTTCCTCCGCAACCACCGCTCCGCGAGCCTCCTCCCTCCGGTGTTCGCCTACGAGGATTTGGCTGCTTCCACGAACAACTTCGATTCGAAGCGGAAAATCGGCGACGGCGGGTTCGGTTCTGTCTACCTCGCGCAACTCCGCAACGGGCGGCTCGCGGCGGTGAAGTACCTCCACCGCCACCACGCCTCCGCCGCGTTCTCCACGAAGTCGTTCTGCAACGAGATTCTCATCCTCTCTTCAATAAACCACCCGAACTTGGTGAAGCTTCACGGATACTGCAGCGACCCGAGGGGGTTGCTTCTGGTCTACGACTACGTCCCCAACGGAACCCTAGCGGAGCATCTGCATAACCGAAAAGGCTCGCTGACGTGGCAGGTGAGGCTCGACATCGCGTTGCAGACGGCGTCAGCGATGGAGTATCTCCATTTCTCCGTGGCGCCGCCGGTTGTTCACAGAGACATAACGTCGTCGAATATTTTCGTAGAGAGGGATATGAGGATCAAGGTGGGGGATTTCGGGCTCTCGAGGCTTTTGGTGGTTCAGGACACGACGTCGTCTTCGGGCGGGTTTGTGTGGACCGGGCCGCAAGGGACGCCGGGGTATCTGGACCCGGAGTATCACCGGTCGTTCCGGTTGACCGAGAAGAGTGACGTGTACAGCTTCGGCGTGGTGTTGTTGGAGCTTATCTCGGGGCTGAGGGCGGTGGACCAGAGTAGGGACAGGCGCGAAATGGCGCTTGCGGATTTGGTCGTTTCGAGGATCCAGATGGGGCAGCTCCACCAGGTGCTCGACCCGGTTCTTGAACGCGGCGGCCACTCCGACGCCGTCGCCGCGGTGGCGGAGCTCGCGTTCCGCTGCGTCGCGGGGGATAAGGACGACCGCCCGGATGCCAGGGAGGTGGTGGAGGAGCTGAAGCGGGTTCGGAGCCGGACGGTGGCGGCGAAGGAGTGA 1845 0.6114 MSLSPTPSLAILLLLFLFSTPTTTQTCSSTPTTHAHPCPPFHSIPAFPFSSSPGCGHPSFQLTCATPHSLISINNLSFSILSYNPNTSSIILSPHHPHATTNCPTFPSIPLRPINLSASPFHVSAATCSRLSFLRPCYPPSLPNCSQCPWQCHLIKNPTHLLHDCRSTHHSPSDTDQSCQTDLLGFLDEILQAGIRLDWDETRDPYFSNCTDCRTSNGLCGFNSSHPEKPFLCFRFHSESTLSPPWIRKIKPNKMAVLSIVVALTSLLLLVSVTTAILRSSKLKSPSSTQQQQDPTALFLRNHRSASLLPPVFAYEDLAASTNNFDSKRKIGDGGFGSVYLAQLRNGRLAAVKYLHRHHASAAFSTKSFCNEILILSSINHPNLVKLHGYCSDPRGLLLVYDYVPNGTLAEHLHNRKGSLTWQVRLDIALQTASAMEYLHFSVAPPVVHRDITSSNIFVERDMRIKVGDFGLSRLLVVQDTTSSSGGFVWTGPQGTPGYLDPEYHRSFRLTEKSDVYSFGVVLLELISGLRAVDQSRDRREMALADLVVSRIQMGQLHQVLDPVLERGGHSDAVAAVAELAFRCVAGDKDDRPDAREVVEELKRVRSRTVAAKE 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1669 614 ProSitePatterns Tyrosine protein kinases specific active-site signature. 447 459 IPR008266 GO:0004672|GO:0006468
Ssu2g1669 614 ProSiteProfiles Protein kinase domain profile. 325 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu2g1669 614 Pfam Wall-associated receptor kinase C-terminal 160 234 IPR032872 -
Ssu2g1669 614 Pfam Protein tyrosine and serine/threonine kinase 328 602 IPR001245 GO:0004672|GO:0006468
Ssu2g1669 614 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.5 27 610 - -
Ssu2g1669 614 CDD STKc_IRAK 331 604 - -
Ssu2g1669 614 Gene3D Phosphorylase Kinase; domain 1 301 403 - -
Ssu2g1669 614 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 27 610 IPR045274 GO:0007166
Ssu2g1669 614 Gene3D Transferase(Phosphotransferase) domain 1 404 614 - -
Ssu2g1669 614 ProSitePatterns Protein kinases ATP-binding region signature. 331 353 IPR017441 GO:0005524
Ssu2g1669 614 SUPERFAMILY Protein kinase-like (PK-like) 306 602 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1669 Ssu-Chr2 65715128 65716972 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1669 3 614 Receptor kinase-like Gene Family AT1G69910 60.315 0.0 723
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Ssu2g1669 PK_Tyr_Ser-Thr 4.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1669 - - gmx:100816739 928.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1669 2 65715128 65716972 Ssu2g1669 2 65715128 65716972 ECH