Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1630 ATGAAGAATTGCTTGGTTTCTTTGTATTACTTGTTTCCTGCAATCGTTGCAATCATTCTTGTGCTGCTTACTCCAATTCCCAGTGCACAGCTAACAACAAGTGAGAACAGAATCCTTCTCCAAGTTCAGAAGCTTCTTGAATATCCTCAAGTTCTTCAAGGATGGACCAACTTGACCAACTTCTGCTCCCTCCCTCCCTCACCTTCTCTCAAGATTGTGTGCTCCAAAGGCCATGTAACCGAGTTAATCATCATTGGGAACAAGAGCACCCCTTCTTCTCACACAACCCAACTTGTGTCTTGGAATTCATCTGAGACTCTCTCAGAAAGGTTCTCCATTGAGTCTTTCTTCACTGTCTTGACAAAGCTTTCAAATCTGAGGGTGTTGTCATTGGTGTCACTTGGTTTGTGGGGTCCGTTACCTTCCAAGATTGACAGGTTTTGGTCTCTTGAGGTGCTGAACATTAGCTCAAACTTCATTTATGGGGAAATCTCATCATCAGTCTCCTCTTTGAAATATCTCAGGAGTCTTGTGTTGGTTGAGAATCTTTTCAATGGGAGTGTGCCTGATCTTGGAAGACTGGCTTCTCTTGAAGAGCTCAACTTAGGTGGCAACAAATTGGGTCCTGAATTCCCCTCATTGAGCAAAAATCTTTTGAGAGTTATCTTGAGAAACAACTCTTTGCGATGTAGAATTCCTCCCCAACTCATGCATGTTTATAAACTTCAGCTATTTGACATCTCTTCCAATGAGATATTTGGAAATATCCCATCATTTgtcttctctcttcctttcctcGAGCACCTAAACTTGGCTGAAAACCAATTAAGTGGTTCCCTTTCTGTGAATGTGTCATGTAGTTCTTCTCTAAAATTTGTTGATATCTCACACAACCTCTTGGTGGGAAAATTGCCATCCTGTATTGGTTCAAAGGCTTCAAACCGAACAACACTTTATTCTGGGAATTGTTTGTCACCCAGAAGCTTAAGTGATCAACATCCAACTTCTTATTGCCAGAAAGTGGAGGCCTTAGCTGTTAAGCCACCACTTAGAAGCCAGAAGAAGGGGTCGGTGATGCAACTTGGCCTAATACTTGGTATTATTGGAGGTGTTGTGGGAATTGCAGGGCTTCTGGTTCTTTTCATTCTGTGCATCTTCAGGAAGTCCAAAGCAGAAAAAGCAGACAATAATTATGACAAAGACATCTCTGTTGCTGATAAATTTTCTGTCCGTGCATATCCAAGACCAAATATTAATGCAAGATGTGTTCCTCTGCCAATGAGGCAACCTGTTCTAGGATTTCCACCATACTGCATTTTCTCATTAGAAGAAATTGAAGATGCTACAAACAACTTTGACCCATCAAATCTAATAGTAGAAGGATCACAGGGACAGCTATATAAAGGTTGGCTCATAGATGGTTCAATGGTCATGGTCAATCATGTAAAACTAAAGCAGAAGAGTTTGCAAAAAAACAGTATTCAGAGCTTGAAGGTATTACCCTGTTTACGGCACAGGCATTTGGTGAGTGTTCTAGGGCACTGTCTCATTACTCATCAGGACCGTCCCCAAATGATAAGCACAATATTCATTGTATTTGAACATGTCTCCAACGTGTCATTGAGGGATTACCTTGCAGATAGGAGAAAAAAGGAAATGCTGAAATGGCCACAAAGAATGGCACTCAGCATAGGCATTGCAAGAGGAATCCAGTTCTTACACATGAGAGTCAATCCTGGCATATTTGGCAACAATATAAAGATTGAGAATATTCTGTTGGATGATAGCCTTAATGCAAAAGTTAGTGGATACAGCATTCCATGGCCATCCAAGGTTAGAGCAGAACATATGTAA 1854 0.4056 MKNCLVSLYYLFPAIVAIILVLLTPIPSAQLTTSENRILLQVQKLLEYPQVLQGWTNLTNFCSLPPSPSLKIVCSKGHVTELIIIGNKSTPSSHTTQLVSWNSSETLSERFSIESFFTVLTKLSNLRVLSLVSLGLWGPLPSKIDRFWSLEVLNISSNFIYGEISSSVSSLKYLRSLVLVENLFNGSVPDLGRLASLEELNLGGNKLGPEFPSLSKNLLRVILRNNSLRCRIPPQLMHVYKLQLFDISSNEIFGNIPSFVFSLPFLEHLNLAENQLSGSLSVNVSCSSSLKFVDISHNLLVGKLPSCIGSKASNRTTLYSGNCLSPRSLSDQHPTSYCQKVEALAVKPPLRSQKKGSVMQLGLILGIIGGVVGIAGLLVLFILCIFRKSKAEKADNNYDKDISVADKFSVRAYPRPNINARCVPLPMRQPVLGFPPYCIFSLEEIEDATNNFDPSNLIVEGSQGQLYKGWLIDGSMVMVNHVKLKQKSLQKNSIQSLKVLPCLRHRHLVSVLGHCLITHQDRPQMISTIFIVFEHVSNVSLRDYLADRRKKEMLKWPQRMALSIGIARGIQFLHMRVNPGIFGNNIKIENILLDDSLNAKVSGYSIPWPSKVRAEHM 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1630 617 PANTHER OS07G0166700 PROTEIN 4 612 IPR045272 GO:0004714|GO:0006468
Ssu2g1630 617 SUPERFAMILY Protein kinase-like (PK-like) 429 604 IPR011009 -
Ssu2g1630 617 Gene3D Ribonuclease Inhibitor 32 217 IPR032675 -
Ssu2g1630 617 Gene3D Transferase(Phosphotransferase) domain 1 536 608 - -
Ssu2g1630 617 ProSiteProfiles Protein kinase domain profile. 452 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu2g1630 617 PANTHER RECEPTOR-LIKE KINASE FAMILY PROTEIN, PUTATIVE-RELATED 4 612 - -
Ssu2g1630 617 Pfam Protein tyrosine and serine/threonine kinase 458 604 IPR001245 GO:0004672|GO:0006468
Ssu2g1630 617 Gene3D Phosphorylase Kinase; domain 1 429 525 - -
Ssu2g1630 617 SUPERFAMILY L domain-like 90 325 - -
Ssu2g1630 617 Gene3D Ribonuclease Inhibitor 218 347 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1630 Ssu-Chr2 64892803 64895558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1630 29 615 Miscellaneous Gene Families AT2G02780 50.164 9.37e-169 495
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Ssu2g1630 PK_Tyr_Ser-Thr 6.3e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1630 - - gmx:100800018 956.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1630 2 64892803 64895558 Ssu2g1630 2 64892803 64895558 ECH