Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1628 atgaaagattcGACAGTGCCAAAGTCAAAAGAGTCTGATCCTGAGAAAGGTCTTGGACAGCAAGCAAAAAACAAGAACGATAATGAGCCACATAACGATCCTATTGCTGTCTTAAAGACTAGTGTGAAGAAGGGTGAAAATGAAAGAGTTCAAGGAGTCAGTGAGGATTTGAATGGTGGTGACAATTGTATCAGTAACAGTTGCCAAAGAAGAGCTTCACTACCTGCTAATTTTAATGATCaagataatgatttatataaCACTCCAACTCCAAGACTGCCTAGTTATATGGCTCCTACTGAATCTGCAAAAGCTAAGCTAAGAGGACAAGGCTCCCCAAGGTTTGCTACTGATTTGGTAGAAAAAAACAGTACCACCAGGCGGCATTCACTTTCATCCTCACTTAATGGCAGGTCAGGTTCATTTTCCCCGAGAGCTGAAAGGCTGATAGCCATGAATGGCAGAGGAGTGATAAGGTCTGATAGATCTCTGTCATCTTCAAGGGATGGGACTGAGAAGTTGATCCAACCACAGTGGAGAAGGTGA 546 0.4139 MKDSTVPKSKESDPEKGLGQQAKNKNDNEPHNDPIAVLKTSVKKGENERVQGVSEDLNGGDNCISNSCQRRASLPANFNDQDNDLYNTPTPRLPSYMAPTESAKAKLRGQGSPRFATDLVEKNSTTRRHSLSSSLNGRSGSFSPRAERLIAMNGRGVIRSDRSLSSSRDGTEKLIQPQWRR 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1628 181 MobiDBLite consensus disorder prediction 74 95 - -
Ssu2g1628 181 MobiDBLite consensus disorder prediction 159 173 - -
Ssu2g1628 181 MobiDBLite consensus disorder prediction 1 62 - -
Ssu2g1628 181 MobiDBLite consensus disorder prediction 126 141 - -
Ssu2g1628 181 MobiDBLite consensus disorder prediction 74 181 - -
Ssu2g1628 181 MobiDBLite consensus disorder prediction 1 32 - -
Ssu2g1628 181 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 6 178 - -
Ssu2g1628 181 Pfam Protein of unknown function (DUF4005) 81 160 IPR025064 -
Ssu2g1628 181 PANTHER IQ-DOMAIN 5-RELATED 6 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1628 Ssu-Chr2 64872164 64874775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1628 70 181 IQD Protein Family AT2G02790 52.212 4.44e-30 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1628 - - gmx:100808200 290.812