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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Ssu2g1623
ATGGCTTTCTTCCCAGCAAATTTCATGCTCCAAACCCCTCACCATGATGATCATCAACCTCCACCTTCGCTCACCTCAATTCTACCCACGTGTACACCTCAAGAATATCATGGGGGAGTGTCCTTTCTAGGAAAGAGATCCATGTCATTTTCATCAGGAATTGAGCATGGAGAAGAGGTCAATGCTGAGGAAGACTTGTCTGATGATGGGTCACAGGCAggggagaagaagaggaggcTTAACATGGAACAAGTGAAGACACTTGAGAAGAGCTTTGAGTTGGGGAATAAGCTTGAGCCAGAGAGGAAAATGCAGCTTGCAAGAGCTCTTGGCTTGCAGCCAAGACAAATTGCTATATGGTTCCAGAACAGAAGGGCTAGGTGGAAGACCAAGCAGTTGGAGAAAGACTATGATCTCCTCAAAAGACAGTATGAAGCTGTCAAGTCAGATAATGATGCACTTCAAGCTCAGAACCAAAAACTCCAGGCTGAGATATTGGCACTGAAAAGTAGAGAGCCAACTGAATCCATCAACCTTAACAAAGAAACAGAAGGATCCTGCAGCAATAGAAGTGAGAACAGCTCAGACATCAAGTTGGATATCTCAAGGACACCAGCTATTGACAGTCCTCTATCCACACATCAGCCAAGCAGACCTCTCTTTCCATCTTCTGCTAGGCCTGCAGGAGTTGCTCAGCTTTTCCAAACTTCTTCAAGACCAGACCTTCCATGCCAAAAGATTGACCAAATAGTCAAAGAAGAAAGCTTAAGCAACATGTTCTGTGGCATGGATGATCAATCCGGGTTTTGGCCATGGTTGGAGCAGCAGCATTTCAATTGA
840
0.4393
MAFFPANFMLQTPHHDDHQPPPSLTSILPTCTPQEYHGGVSFLGKRSMSFSSGIEHGEEVNAEEDLSDDGSQAGEKKRRLNMEQVKTLEKSFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKSDNDALQAQNQKLQAEILALKSREPTESINLNKETEGSCSNRSENSSDIKLDISRTPAIDSPLSTHQPSRPLFPSSARPAGVAQLFQTSSRPDLPCQKIDQIVKEESLSNMFCGMDDQSGFWPWLEQQHFN
279
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Ssu2g1623
279
MobiDBLite
consensus disorder prediction
179
199
-
-
Ssu2g1623
279
PANTHER
HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-13
1
279
-
-
Ssu2g1623
279
CDD
homeodomain
76
132
IPR001356
GO:0003677
Ssu2g1623
279
Pfam
Homeodomain
76
129
IPR001356
GO:0003677
Ssu2g1623
279
Coils
Coil
123
171
-
-
Ssu2g1623
279
MobiDBLite
consensus disorder prediction
58
80
-
-
Ssu2g1623
279
ProSitePatterns
'Homeobox' domain signature.
106
129
IPR017970
GO:0000981|GO:0006355
Ssu2g1623
279
Gene3D
-
68
137
-
-
Ssu2g1623
279
SMART
HOX_1
74
135
IPR001356
GO:0003677
Ssu2g1623
279
PANTHER
HOMEOBOX-LEUCINE ZIPPER PROTEIN
1
279
IPR045224
GO:0003700
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Ssu2g1623
Ssu-Chr2
64692825
64694378
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Ssu2g1623
1
279
Homeobox Transcription Factor Family
AT1G69780
64.407
1.69e-122
350
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
HB-HD-ZIP
Ssu2g1623
Homeodomain
1.4e-15
CL0123
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Ssu2g1623
K09338
-
gmx:100814080
533.487
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Ssu2g1623
2
64692825
64694378
Ssu2g1623
2
64692825
64694378
ECH
Ssu2g1623
2
64692825
64694378
Ssu5g1224
5
40094463
40096195
PCT
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