Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1607 ATGGACGTTTCGGAGCTAGCCAAGAAGCTCAGCCTCTCCGACTCCAAACTCGTCGTCCGAAAAGCCGCGGAGCTCCGTCGCCTCTGCGATGTCCAGTTCGATTCCTCCGTCATTGGAGTCGGCGAGGTTGCGAAATCTCTCATATGCTTGGAAATCGCGGCCACGAGGCTCGGCGTTCTCTTCGACCGATCCTCTGCGGTGAGGCTCAGCGGAATGTCCGAAAGAGCTTACATCAGATCCTACAATTCGCTCCATAACGGCCTTGGCGTCAAGATGAAGATAGATGTGAGGGAATTGGCGATTCAGTTCGGCTGCGTTCGCATCATCCCTCTCGTTCGCGACGGTCTCAAACTATATAAGGATCGGTTTCTTTCGTCGTTGCCGGCTTCTCGCCGTGCAAGTGCTGATTTCACGCGTCCAGTGTTCACCGCTGTCGCATTTTATTTATGTGCTAAAAAGCACAAGCTCAAAGTGGACAAGATTAAGCTAATTGAGCTCTGTGGTACATCTGAATCTGAGTTTTCTAGTGTTTATGCTACTATGAAGGATTTGTGCCATGATGTTTTTGGGGTTGCGAAGGAAAAGAAGGATCCTAGGGAAGTGCAGTCAAATCGAGATTTGCTTGATGTTTTACCAAGTAAAAGGAAAGCTGAGGAAGGTGGGTATTCGTCCGATGATGGTCCAGAGCTTTCAAGTTataaaaaagccaaaaaaagggaaaaacgtGATTATGACAAGTGGAAATCTTCTGTGCTTGCATCCAATCAACAAAACAAGACAGAAGcgCCTTGCAAGCGAACCAAACAGACTCGTCTCAACTTTCTCAAAGAATCTTCCGATAATCAGAAGTTAGAGGCCATGTGA 864 0.4641 MDVSELAKKLSLSDSKLVVRKAAELRRLCDVQFDSSVIGVGEVAKSLICLEIAATRLGVLFDRSSAVRLSGMSERAYIRSYNSLHNGLGVKMKIDVRELAIQFGCVRIIPLVRDGLKLYKDRFLSSLPASRRASADFTRPVFTAVAFYLCAKKHKLKVDKIKLIELCGTSESEFSSVYATMKDLCHDVFGVAKEKKDPREVQSNRDLLDVLPSKRKAEEGGYSSDDGPELSSYKKAKKREKRDYDKWKSSVLASNQQNKTEAPCKRTKQTRLNFLKESSDNQKLEAM 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1607 287 CDD Orc6_mid 93 188 - -
Ssu2g1607 287 MobiDBLite consensus disorder prediction 230 248 - -
Ssu2g1607 287 Gene3D - 92 188 - -
Ssu2g1607 287 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 6 1 279 IPR020529 GO:0005664|GO:0006260
Ssu2g1607 287 MobiDBLite consensus disorder prediction 215 287 - -
Ssu2g1607 287 PANTHER BNAC05G50940D PROTEIN 1 279 - -
Ssu2g1607 287 Pfam Origin recognition complex subunit 6 (ORC6) 4 91 IPR008721 GO:0003677|GO:0005664|GO:0006260
Ssu2g1607 287 MobiDBLite consensus disorder prediction 249 263 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1607 1 278 Core DNA Replication Machinery Family AT1G26840 64.388 3.46e-130 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1607 K02608 - gmx:100777539 498.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1607 2 64267618 64270619 Ssu2g1607 2 64267618 64270619 ECH