Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1595 ATGTTGAATGTTGACGTCGTTGGgaacaaaaaaaggaagaggtGTGGGAGGGTTTTCAGGTTCAAGAATTTTGGTGAACCTGGATACCCTGTTATGTTTACCGGGCCATTTCGTGAGAACGTGAATGCGTTACTTGAATATGCGAATTTGGAGAGTGATTTAAGCATGGGAATGCCAATGTGGTCTTTTCAACTTGAAGTTCATCACCACCCACCTTTACATATCTTGTTGTTTGTGATTGAGGAGCCAATAGAGGCAGCTCTAAATCGTCACTGCAAGCATTGTCAATACGTTGGCTGGGGCAACCATTTCATTTGCAATAAGAAGTATCACTTCGTGTTACCCTCAAAGGAGGCACTGGCTACCTGCACGAGCTGTGAAGGCTGCTGTGATGCAATTGCTACAATTAATAATGGTAAGtccaaattaattgaattacagGGTCATATGATGCATGGTGTTTTTCACTCTAATGGATTCGGGCATTTGCTATGTGTCAATGGATTGGAAATGGGCTCGAATTTGGCTGGGAACCAGATCATGGAGTTTTGGAACCGTTTGTGCAACGGATTACAAGCAAGGAAGGTGAGTTTGAATGACATTTCACAAAAGAAAGGAATGGAACTAAGACTGGTGAATGGAATAGCATATAGTGAGTCATGGTTCGGTCGTTGGGGTTACAAATTTGGTCGAGGCTGCTTTGGTGTAACTCAATCCATGTACCACAAGGCCATACAGGCAATAAGAAGTATGCCACTATACTTAATCATACACCACACTGGCAATTCCAACCATGGCATTCCACTCATCTTCTCAAGGTACCAAACACTTTCAGACCAGTCCTTAGTTACCCTTGGTGACCTATTTTGTTACATGTTAGACATTAAATCACACCTTCCCTATGAAACTTGCATTGGTTTGTGTAACACAAGTGACTTGGTTGAGACCAATTGTCGTTGGTCCCCTAAAAGGATTGAGATGGCAATAAGGGTCATTGTTGAGGCCTTGAAAAGAACAGAGTTTAGATGGATTTCAAGGCAAGAAGTTAGAGATGCTGCTCGTGCATACATTGGAGACACAGACATTTCTAATGTGTACCCTTATAATGAAGGCTTGGTTATGAGTAACAAAATGAAGGACAAGTACAAGATCACAAGGGCTCAACTAATGAAAGACATGCTTTATTTGTACAAGTACATTCTTATAGACCCAAAACCAATGATGGGATCAGAATTTCTTTCAGCTATACCATTGGCAGCTAGGATAATTCTTGAcaccaaatattttataaaagattactTTGGAGATGTTCCTTACCAAGTTGAATTAGGCTCGAAAGGAAAAGTCAACCtttattgtacaattttgtTAAGGAACAATGTTGGCCATGATGAGTACTTCAACAAGGCCATTATACCACCCCATGAATGTATCACATTGAAAAGTAGTGCTACTATCAATGACTTGAAGCTAGAAGTTGAAAGGAATTTTAGAGAAATCTATTGGGGGTTAAGGAGTTTTGTGGTGGAATCGATTAGGAATTTAAGTGCCAATAATGGAACAGAAATGGTTTTTAGGCTAATTGAAATGGGTGGAAAAGTTATACTTGAGGGTTGGCATGGTGCCATGGGAATAAACATGATTGAGCAAATATGTGAAAATGATCCAAACAAGGGTATAATGGACTTGCACTTGTGGAACTATAGAAGATGA 1713 0.387 MLNVDVVGNKKRKRCGRVFRFKNFGEPGYPVMFTGPFRENVNALLEYANLESDLSMGMPMWSFQLEVHHHPPLHILLFVIEEPIEAALNRHCKHCQYVGWGNHFICNKKYHFVLPSKEALATCTSCEGCCDAIATINNGKSKLIELQGHMMHGVFHSNGFGHLLCVNGLEMGSNLAGNQIMEFWNRLCNGLQARKVSLNDISQKKGMELRLVNGIAYSESWFGRWGYKFGRGCFGVTQSMYHKAIQAIRSMPLYLIIHHTGNSNHGIPLIFSRYQTLSDQSLVTLGDLFCYMLDIKSHLPYETCIGLCNTSDLVETNCRWSPKRIEMAIRVIVEALKRTEFRWISRQEVRDAARAYIGDTDISNVYPYNEGLVMSNKMKDKYKITRAQLMKDMLYLYKYILIDPKPMMGSEFLSAIPLAARIILDTKYFIKDYFGDVPYQVELGSKGKVNLYCTILLRNNVGHDEYFNKAIIPPHECITLKSSATINDLKLEVERNFREIYWGLRSFVVESIRNLSANNGTEMVFRLIEMGGKVILEGWHGAMGINMIEQICENDPNKGIMDLHLWNYRR 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1595 570 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 8 363 - -
Ssu2g1595 570 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 361 562 - -
Ssu2g1595 570 PANTHER PHD FINGER PROTEIN MALE STERILITY 1 8 363 - -
Ssu2g1595 570 PANTHER PHD FINGER PROTEIN MALE STERILITY 1 361 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1595 Ssu-Chr2 63868969 63872057 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1595 10 543 PHD Transcription Factor Family AT5G22260 47.049 7.67e-172 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1595 - - gmx:100780210 1048.88