Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1594 ATGCCCGCACTCGCGCCGCCTCGAACCGCACCCCAATGGACCCGATCAAGACCCGCTCCGCCAACCTCTTCGCCCGCCCCCCAAAGCCCTCGCCATCCCGCTCCCGCGTCACCCTCCTCCTCCCCCTCGCGCTctccctcctcctcctcctctcctTCTACGCCCTCTCCCGTTCCTCGTCGGAAGCCAATTTCCGGTACCGGATCATCGTCGACGGCGGGAGCACCGGCTACTCGCGTGCACGTGTTTAAGTACAGGTCAGGCGAGGCGTTGGAGTTCGGGAAGGAGGGGCCGGCGTCGATGCGCGTGAACCCGGGGCTGTCGGCGTTCGCGGAGGATCCGGACGGCGCGGGCGGGTCGGTGGCGGAGCTGGTGGAGTTCGGGAAGGGGCGGATCCCGAGGGAGAGCTGGGGGGAGACGGAGGTGAGGCTAATGGCCACGGCGGGGTTGAGGATGCTCGACGCCGAGGTGCAGGAGAGGATTCTGGAGTCGTGTAGGACGGTGCTGCGTGCGTCTGGGTTCAGGTTTAGGGACGAGTGGGCTTCCGTCATCACAGGTTCTGATGAAGGAGTATATGCTTGGGTTGTTGCTAATTATGCACTTGGCACTCTTGGAGGTGATCCTTTGGATACAACTGGGATTATTGAACTTGGTGGTGCTTCTGCTCAGGTGACCTTTGTATCAAGAGAAGCGGTGCTGCCTTCGTTCTCACGAACTGTTAAATTTGGGAATACCACTTACAACCTTTACAGCCACAGCTTTCTTCATTTTGGCCTGAATGCTGCTCATGACTCATGGAAAGAAGCACTTGTATTGGGGGAATTTAACTTGGCTTCTCAATCTCTTCGAGAAGGGGTGCGGATAGATCCTTGTACACCTGCAGGATACTCTTATAATGTTGATTCATGGAAGTTCTCTCCTAGCTCAGAGAGTGAAAAAAACCAATATCAGTCCACTGTCCAAACAAGGGGAAACTTTTCAGAGTGCAGATCTGCAGCACTTATGCTGCTACAAAAAGGGAAAGAATTATGTTCCTATCAGCATTGTGACATAGGATCAACTCTCATACCAAAGCTTCAGGGGAAATTTTTGGCCacagaaaatttcttttacacATCAAAGTTTTTTGGATTGGGGCCAAGGGCCTATCTGTCCAAGTTGATGTATGCTGGGCAAGAATTCTGTGGAGAGGATTGGTTAAGGCTGAAGGAAAAATATGTCTCCCATGATGAGGAAGATTTACTTCGGTATTGCTTCTCTTCAGCATACATTGTTGCTTTGCTTCACGACAGTCTTGGGATTGCTTTGGATGATGAGAGGGTCAAGGTTGCTAATCAGGTGGGAAGTATTCCACTTGATTGGGCTTTGGGAGCTTTTATTCTGCAAACAACAGCTGATGCAGATATACCGAAGCATAACTGGATTGCCACCATTTTCACTGATGAATCACCTACTCTTTTCTCAATAATtggaatttttataatgttgttAACGATATGGTCTATATCTAGGTGGAGGAAACCTCAGCTGAAGACAATTTATGATCTAGAAAAAGGACGATATATAACCACACGTGTTGGTAGATAA 1587 0.4909 MPALAPPRTAPQWTRSRPAPPTSSPAPQSPRHPAPASPSSSPSRSPSSSSSPSTPSPVPRRKPISGTGSSSTAGAPATRVHVFKYRSGEALEFGKEGPASMRVNPGLSAFAEDPDGAGGSVAELVEFGKGRIPRESWGETEVRLMATAGLRMLDAEVQERILESCRTVLRASGFRFRDEWASVITGSDEGVYAWVVANYALGTLGGDPLDTTGIIELGGASAQVTFVSREAVLPSFSRTVKFGNTTYNLYSHSFLHFGLNAAHDSWKEALVLGEFNLASQSLREGVRIDPCTPAGYSYNVDSWKFSPSSESEKNQYQSTVQTRGNFSECRSAALMLLQKGKELCSYQHCDIGSTLIPKLQGKFLATENFFYTSKFFGLGPRAYLSKLMYAGQEFCGEDWLRLKEKYVSHDEEDLLRYCFSSAYIVALLHDSLGIALDDERVKVANQVGSIPLDWALGAFILQTTADADIPKHNWIATIFTDESPTLFSIIGIFIMLLTIWSISRWRKPQLKTIYDLEKGRYITTRVGR 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1594 528 Gene3D - 73 460 - -
Ssu2g1594 528 MobiDBLite consensus disorder prediction 18 40 - -
Ssu2g1594 528 Pfam GDA1/CD39 (nucleoside phosphatase) family 73 464 IPR000407 GO:0016787
Ssu2g1594 528 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 68 523 IPR000407 GO:0016787
Ssu2g1594 528 Gene3D Exopolyphosphatase. Domain 2 185 448 - -
Ssu2g1594 528 PANTHER APYRASE 6-RELATED 68 523 - -
Ssu2g1594 528 MobiDBLite consensus disorder prediction 1 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1594 Ssu-Chr2 63858765 63866196 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1594 101 463 Nodulin-like Gene Family AT4G19180 27.660 8.42e-37 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1594 K01510 - gmx:100807287 810.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1594 2 63858765 63866196 Ssu2g1594 2 63858765 63866196 ECH