Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1503 aTGGCTCTTCTGATGTATTTTGTGCTTTTTCTGACCCTTACTGGCCATTCAAGTGCTCTTTACTGTGTATGTAAAGATGGTGTGGGTGATCAAGCTCTTCAAAAAGCAATAGATTATGCTTGTGGTGCTGGAGCTGACTGTACCCCTATTATCCAAAATGGAGCCTGTTACCAACCTAACACTGTGAAGGATCACTGCAACTATGCTGTTAATAGCTATTTCCAGAGAAAGGGTCAAGGTCAGGGAAGCTGTGATTTTGCTGGTGCTGCCACCCCCAGTCAAACTCCACCTACTTCAGCATCTACATGTGTTTACCCCTCAAGTCCTAGCAATGCAGGAACAGGCACCACAGCAACCCCAACAACCAATACACCAACAGGCACACCATCCACCTTAACTCCAACCACTCCCACAACTGGTACAACTCCAGGCACAACCACAGGCACTGGCACAACTCCAGGCACAACCACTGGCACAGGCACAGGTAGTCCTAATGTGTTTGGAATTAGTCCAACATCTTCAACTGGAACAGGATTCAATGACTCAAGCAATGGGGTGGTTCATTTGAAAGACACTTGCATGTTACTATTGTCCCTTGTTCTTACCTTTTTGCTAGTGTCAAGGGTCTAA 630 0.4619 MALLMYFVLFLTLTGHSSALYCVCKDGVGDQALQKAIDYACGAGADCTPIIQNGACYQPNTVKDHCNYAVNSYFQRKGQGQGSCDFAGAATPSQTPPTSASTCVYPSSPSNAGTGTTATPTTNTPTGTPSTLTPTTPTTGTTPGTTTGTGTTPGTTTGTGTGSPNVFGISPTSSTGTGFNDSSNGVVHLKDTCMLLLSLVLTFLLVSRV 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1503 209 Pfam X8 domain 21 91 IPR012946 -
Ssu2g1503 209 PANTHER CARBOHYDRATE-BINDING X8 DOMAIN PROTEIN 1 169 - -
Ssu2g1503 209 SMART X8_cls 20 105 IPR012946 -
Ssu2g1503 209 MobiDBLite consensus disorder prediction 97 178 - -
Ssu2g1503 209 PANTHER BETA-1,3 GLUCANASE 1 169 IPR044788 -
Ssu2g1503 209 Gene3D - 15 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1503 Ssu-Chr2 61874287 61875996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1503 21 98 Glycoside Hydrolase AT2G01630 44.304 2.85e-20 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1503 - - gmx:100789955 248.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1503 2 61874287 61875996 Ssu2g1503 2 61874287 61875996 ECH
Ssu5g1371 5 44626545 44628296 Ssu2g1503 2 61874287 61875996 PCT