Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1502 ATGAGTAGTTGTGTGAAGCCACTGGTGCAGAGCATGGAAACTCCAATCGTTCTTCTACATGGTTTTGACAGCTCATGTTTAGAATGGAGATATGTATTACCATTGCTTGAGGAATCTGGTTTTGAGACCTGGGCCATTGACATTCTTGGTTGGGGTTTCTCTGATTTAGAAAAACTTCCTCCCTGTGATGTGGTATCAAAGCGTGATCACTTCTACCAGTTTTGGAAGTCCTACATCAAAAGGCCAATGATATTGGTTGGACCAAGCCTTGGCTCTGCTGTTGCCATTGACTTTGCAGTCAATTATCCAGAAGCTGTGGAGAAGCTTGTTCTGATTGGTGCTAGTGTGTATGCAGAGGGAACTGGAAAGCTAGCAACCTTACCTAAAGCAGTAGCCTATGCTGGGGTTAATTTATTGAAGAGCATTCCATTACGCCTATATGCCACCTATTTGACCTTCACAAACATCTCTTTCAGCACCAGCCTTGATTGGACTAATGTGGGCCGCTTGCATTGTTTATTGCCTTGGTGGGATGATGCTACTGTGGATTTTATGACAAGTGGCGGTTACAATGTTGCTTCTTTGATAGGAAAGGTAAAACAGAAAACATTGATAATATGGGGTGAAAATGACCGCATCATCAGCAATAAGTTTGCAGTGCAACTACACTGTGAATTACCTGATGCAATTATACGACAAATACCCAATTGTGGACATCTTCCTCATCTGGAAAGACCAGATTCTACTatcaaattaattgttgaatttgtgcAAAAGGAGACTAAGAAATTAAGCCAATGTGTTGCACAAGTATAA 816 0.4056 MSSCVKPLVQSMETPIVLLHGFDSSCLEWRYVLPLLEESGFETWAIDILGWGFSDLEKLPPCDVVSKRDHFYQFWKSYIKRPMILVGPSLGSAVAIDFAVNYPEAVEKLVLIGASVYAEGTGKLATLPKAVAYAGVNLLKSIPLRLYATYLTFTNISFSTSLDWTNVGRLHCLLPWWDDATVDFMTSGGYNVASLIGKVKQKTLIIWGENDRIISNKFAVQLHCELPDAIIRQIPNCGHLPHLERPDSTIKLIVEFVQKETKKLSQCVAQV 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1502 271 PRINTS Epoxide hydrolase signature 40 55 IPR000639 GO:0003824
Ssu2g1502 271 PRINTS Epoxide hydrolase signature 234 256 IPR000639 GO:0003824
Ssu2g1502 271 PRINTS Epoxide hydrolase signature 99 112 IPR000639 GO:0003824
Ssu2g1502 271 PRINTS Epoxide hydrolase signature 20 38 IPR000639 GO:0003824
Ssu2g1502 271 PANTHER HYDROLASE 1 271 - -
Ssu2g1502 271 SUPERFAMILY alpha/beta-Hydrolases 14 259 IPR029058 -
Ssu2g1502 271 Gene3D alpha/beta hydrolase 9 266 IPR029058 -
Ssu2g1502 271 PANTHER ALPHA/BETA FOLD HYDROLASE 1 271 - -
Ssu2g1502 271 Pfam Alpha/beta hydrolase family 16 249 IPR000073 -
Ssu2g1502 271 PRINTS Alpha/beta hydrolase fold signature 99 112 IPR000073 -
Ssu2g1502 271 PRINTS Alpha/beta hydrolase fold signature 203 217 IPR000073 -
Ssu2g1502 271 PRINTS Alpha/beta hydrolase fold signature 40 55 IPR000073 -
Ssu2g1502 271 PRINTS Alpha/beta hydrolase fold signature 85 98 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1502 Ssu-Chr2 61860205 61868915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1502 15 257 Acyl Lipid Metabolism Gene Families AT3G10840 24.127 3.75e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1502 - - gmx:100800197 527.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1502 2 61860205 61868915 Ssu2g1502 2 61860205 61868915 ECH
Ssu5g1372 5 44634295 44641605 Ssu2g1502 2 61860205 61868915 PCT