Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1489 ATGGAAGAAACACAGGGCCAGTATTATTCTTCCAGTCTACCTGAGTCTTCCTTATCTCATGACGGTGGTGGAAGGTCTTATTTCAATGGGCAAATTAATCGTGGGACTGGTATATCAGGCCTGAAGAAGAGAGGTCATGGAAGTCGCTCTTGGATTAAAATCAGTCAGGATGGGAATTCTCAGACTGTGACCCTTGACAAGGCAACTATAATGAGACACTGTTCTTTGCCTTCTAGAGATCTGCGGCTGTTGGATCCGATGTTCATTTATCCTTCTACAATATTAGGACGGGAGAAGGCTATTGTAGTCAACCTTGAGCAAATCCGGTGTGTAATCACTGCTGATGAGGTCATCCTGATGAATTCATTGGATGGTAGTGTTGGTCAGTACAGGTTAGAATTATGCAATCGGCTTCAGAATGAAAAAGCTGATGATCTACCTTTTGAATTTAGGGCACTAGAGTTGGCTCTAGAATTGACATGCACATCTTTAGATGCTCAGGTGAAAGAACTGGAAATGGAAATATATCCTGTGCTAGATGAACTGGCCTCATCTATCAGTACTCTCAATCTGGAACGTGTTCGAAGATTTAAAGGTCACCTGCTTGCTTTGACTCAACGAGTTCAGAAGGTTCGTGATGAAATAGAACATCTCATGGATGATGATGGTGACATGGCTGAGATGTGCCTAACTGAGAAAAGGAGAAGATCAGATACTTACACTTCTAATGATTATTTTCAAACCCGTGCATCAGGTAGAGTGATTTCAAAATCGGCTCCTGCTTCACCGGAGCGATCAATTAGTGGAGTTCAGATGTTGCAAAGGGCTTTCAGCAGCATTGGAAATTCTAGTAAACATGGTAGTTCAATGGATTCATCTGATAATGGGGAAAGGATTGAGCCACTGGAAATGTTGCTTGAAGCATACTTTATAGTCATTGATAATACTCTTAACACACTATTATCGCTCAAAGAATATATTGACGACACAGAGGATTTTATCAACATAAAATTAGGAAATATTCAGAACCAGCTAATACAGTTTGAGTTGCTTCTTACAGCTGCTACATTGGTAGCTGCAATATTTGCTGCCGTAGCAGGAGTATTTGGAATGAACTTTGAAACCACAGTTTTTGACTATCCATCCGGATTCAATTGGGTTTTGGTACTTACTGGAATTGCTTGTGCAGCATTATATTTCGCCCTCCTATTCTATTTTAAGTACAAGAAAGTGCTTGCAGCATAA 1245 0.4056 MEETQGQYYSSSLPESSLSHDGGGRSYFNGQINRGTGISGLKKRGHGSRSWIKISQDGNSQTVTLDKATIMRHCSLPSRDLRLLDPMFIYPSTILGREKAIVVNLEQIRCVITADEVILMNSLDGSVGQYRLELCNRLQNEKADDLPFEFRALELALELTCTSLDAQVKELEMEIYPVLDELASSISTLNLERVRRFKGHLLALTQRVQKVRDEIEHLMDDDGDMAEMCLTEKRRRSDTYTSNDYFQTRASGRVISKSAPASPERSISGVQMLQRAFSSIGNSSKHGSSMDSSDNGERIEPLEMLLEAYFIVIDNTLNTLLSLKEYIDDTEDFINIKLGNIQNQLIQFELLLTAATLVAAIFAAVAGVFGMNFETTVFDYPSGFNWVLVLTGIACAALYFALLFYFKYKKVLAA 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1489 414 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 351 402 IPR045863 -
Ssu2g1489 414 CDD Mrs2_Mfm1p-like 51 411 IPR039204 -
Ssu2g1489 414 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 2 413 IPR039204 -
Ssu2g1489 414 MobiDBLite consensus disorder prediction 1 20 - -
Ssu2g1489 414 Gene3D Magnesium transport protein CorA, transmembrane region 126 345 - -
Ssu2g1489 414 Gene3D - 39 122 - -
Ssu2g1489 414 Coils Coil 201 221 - -
Ssu2g1489 414 Gene3D Magnesium transport protein CorA, transmembrane region 352 412 - -
Ssu2g1489 414 PANTHER MAGNESIUM TRANSPORTER MRS2-5 2 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1489 Ssu-Chr2 61724055 61727815 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1489 1 412 MRS2 Gene Family AT2G03620 64.608 4.04e-180 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1489 K16075 - gmx:100803935 707.983