Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1488 ATGGAGGACAATATTAATAACCATCCGCAACAGTCACAGCAGCAGCAACAGCAGAGAGTGTTTGAGAAGATGGAGCGGTACTCGAGGGATTTGCTTCGGGGCTTCGGCGGTGTTACTGTCGGAGATGACAACGTTGACATTACCGAACAGCAACGTCAGGAGGAGGAGGATGGAGAGGTTGAGTTGAACCTTGGTCTCTCTTTGGGGGGAAAATTTGGGGTGGACAAGAGCGCGAGGAAGAAGCTCACGCGTTCTTCTTCCGTGGTGGGGACAATGTCTCTGCTGCGCGAGGGGAACGCGGTGGCGCCGGCGGTCATGAGGACGTCGTCGCTGCCGACGGAGGCGGCGGAGGAGTGGCGGCGGAGGAAGGAGATGCAGACGCTGCGCCGGATGGAGGCGAAGCGGCGCCGGTCGGAGAAGCAGAGCCAGAGAGGTTCCCGGGAGGTCGCCGCCGCCGGGGAGGAGGTGGAGGGCGGAGGTGCGGCAGTGAGGGTGAACAGGTACGGTTCTCCGGCGACGGGTTTCGAGTGGGGCGCGGCGGCGAAGCAGGTTGTTCTCGGTGATGTGGTGGGGAAGGGGAAGGGGAAGGGTTTTCAAGGGCTGTTTGGGCAGCCATCTTCTCAGGGCTCGGCGGATTCGCAAGGGGGAAGCTCTTCGTCGGTGTCAGACATGGATAGCAAGGCTTTTATAGGATCAGGTAGCGATGGTGAAGCAAGAAGCCCTGCTAGTAATCAATCAAAGCAAGAACGAAGCATTCAGGATGTTGTGGGTTTAGGGGTAAAGACAAATGAGAATATGACTAGAACTTCCAAAGATGAGGTGGAGAATCCATCTAGAAAACCCCATCCTGCCCAAAATATAATGGGGAAGGCAATTGGGACAAACTCAATGGAAGACATGCCTTGTGTGTTTACAAAAGGAAATGGTCCTAATGGAAGAAGAATTGAGGGAATCTTGTACAAATATGGTAAAGGGCAGGAAGTGAGGATCATGTGTGTGTGCCATGGAAACTTCCTCTCTCCAGCAGAGTTTGTTAAGCATGCTGGTGGTGGGGATGTTGCACACCCCCTTAAACACATTGTTATGAACCCTTCTGCTACTCCCTTTTAG 1110 0.5441 MEDNINNHPQQSQQQQQQRVFEKMERYSRDLLRGFGGVTVGDDNVDITEQQRQEEEDGEVELNLGLSLGGKFGVDKSARKKLTRSSSVVGTMSLLREGNAVAPAVMRTSSLPTEAAEEWRRRKEMQTLRRMEAKRRRSEKQSQRGSREVAAAGEEVEGGGAAVRVNRYGSPATGFEWGAAAKQVVLGDVVGKGKGKGFQGLFGQPSSQGSADSQGGSSSSVSDMDSKAFIGSGSDGEARSPASNQSKQERSIQDVVGLGVKTNENMTRTSKDEVENPSRKPHPAQNIMGKAIGTNSMEDMPCVFTKGNGPNGRRIEGILYKYGKGQEVRIMCVCHGNFLSPAEFVKHAGGGDVAHPLKHIVMNPSATPF 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1488 369 MobiDBLite consensus disorder prediction 200 287 - -
Ssu2g1488 369 MobiDBLite consensus disorder prediction 127 157 - -
Ssu2g1488 369 MobiDBLite consensus disorder prediction 201 227 - -
Ssu2g1488 369 Coils Coil 121 148 - -
Ssu2g1488 369 MobiDBLite consensus disorder prediction 237 265 - -
Ssu2g1488 369 Pfam Ethylene-responsive binding factor-associated repression 55 90 IPR012463 -
Ssu2g1488 369 MobiDBLite consensus disorder prediction 1 23 - -
Ssu2g1488 369 PANTHER AFP HOMOLOG 2 24 367 IPR031307 GO:0007165
Ssu2g1488 369 MobiDBLite consensus disorder prediction 1 21 - -
Ssu2g1488 369 PANTHER NINJA-FAMILY PROTEIN AFP1 24 367 - -
Ssu2g1488 369 MobiDBLite consensus disorder prediction 127 144 - -
Ssu2g1488 369 Pfam Putative nuclear localisation signal 106 226 IPR032310 -
Ssu2g1488 369 Pfam Tify domain binding domain 328 362 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1488 Ssu-Chr2 61668311 61671823 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1488 - - gmx:100776452 432.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1488 2 61668311 61671823 Ssu2g1488 2 61668311 61671823 ECH