Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1480 ATGTTTTACCTCACCCCCGGCGGGCTCGCTTGGGCTCTATCCAAGTCCTCGGCCCGGTCCATTATCCCGGGCCCGGTCCCAGCCCTGCTCGGTGTCTTCACCGGCCCGACCCCGCACCGCGCTCTGGCCAAGCTCGCCCGCGCCCACCGCGCCGAGAGGCTCATGGCCTTCTCCGTCGGCCTGACCCGGTTCGTCATCTCGAGCGAACCGGAAACTGCGAAGGAAATTCTCGGTAGCCCCGGCTTCGCCGACAGGCCGGTGAAGGAATCCGCCTACGAGCTCCTGTTCCACCGCGCAATGGGGTTCGCGCCGTACGGAGAGTACTGGAGGAACCTGAGGAGAATCTCCGCGCTCCACCTCTTCTCCCCGAAGAGGATTGCGGGGTTCGAAGTGTTCAGGCGCGAGGTGGGTTTGAAAATGGTTGGGGAAATGAGAAAGGCGATGAGTGGGAAAGGACACGTGGAGGTTAGGACGGTCCTTCACTTCGGGTCGTTGAGCAATGTGATGATGACGGTGTTTGGGCGGTCTTACGGGTTTTTTGAAGGTGAGGGGGCCGAGCTTGAGGGGTTGGTGAGTGAGGGGTATGAGCTGTTGGGCGTGTTTAACTGGAGCGACCATTTTCCGGTGCTGGGGTGGTTGGATTTGCAGGGTGTGAGGAGGAGGTGTAGGTGTCTGGTTGCGAAGGTTAATACTTTTGTTGGGAATATTATCGACGAGCATAGAATGAAGAGGGTGAATGGTGAGTGTGTGAAAGACGATGGCACGGGTGACTTTGTTGATGTGTTGCTTGATTTGGAGAACGAAAACAAGCTAAGTGAGTCTGATATGATCGCTGTTCTCTGGGAAATGATATTCAGGGGGACTGACACGGTGGCAATATTGCTGGAGTGGATTTTGGCGAGGATGGTTCTCCACCCTGAGATACAAGCTAAGGCTCAGAGGGAGATAGACGGGGTGTGTGGAGGGAGGCTTGTTTCTGATGCTGATATTCGAAACCTGCGTTATCTTCAGTGCATTGTGAAGGAGGTTCTGAGGGTGCACCCACCCGGGCCTTTGCTTTCTTGGGCTCGTTTAGCGGTGCATGATGTTACGGTGGGCGACAAGCACGTTCCGAAGGGAACCACTGCTATGGTGAACATGTGGGCCATAACGCGTGACGAGAGGGTGTGGGCCGAGCCAGAGGAGTTCAAGCCGGAGCGGTTCGCGGAGGAGGATGTCAGCATAATGGGGTCTGATTTGAGGTTGGCTCCGTTTGGGTCTGGGAGAAGGGTGTGTCCTGGGAAGGCCTTGGCTTTGGCCTCTGTTCACCTTTGGTTGGCGCAGTTGCTCCAGAGTTTTCGTTGGGTTCCCGCTGATAGTGCCACTCTCAACTTGTCCGAGTGTCTTAAACTTTCTATGGAGATGAAGAATCCACTGGCTTGCAAGGCTGTGCCTAGGGTTCCTGTTTGA 1449 0.5611 MFYLTPGGLAWALSKSSARSIIPGPVPALLGVFTGPTPHRALAKLARAHRAERLMAFSVGLTRFVISSEPETAKEILGSPGFADRPVKESAYELLFHRAMGFAPYGEYWRNLRRISALHLFSPKRIAGFEVFRREVGLKMVGEMRKAMSGKGHVEVRTVLHFGSLSNVMMTVFGRSYGFFEGEGAELEGLVSEGYELLGVFNWSDHFPVLGWLDLQGVRRRCRCLVAKVNTFVGNIIDEHRMKRVNGECVKDDGTGDFVDVLLDLENENKLSESDMIAVLWEMIFRGTDTVAILLEWILARMVLHPEIQAKAQREIDGVCGGRLVSDADIRNLRYLQCIVKEVLRVHPPGPLLSWARLAVHDVTVGDKHVPKGTTAMVNMWAITRDERVWAEPEEFKPERFAEEDVSIMGSDLRLAPFGSGRRVCPGKALALASVHLWLAQLLQSFRWVPADSATLNLSECLKLSMEMKNPLACKAVPRVPV 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1480 482 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 418 427 IPR017972 GO:0005506|GO:0016705
Ssu2g1480 482 Gene3D Cytochrome P450 14 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1480 482 PRINTS E-class P450 group I signature 415 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1480 482 PRINTS E-class P450 group I signature 337 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1480 482 PRINTS E-class P450 group I signature 425 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1480 482 PRINTS E-class P450 group I signature 379 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1480 482 PRINTS E-class P450 group I signature 295 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1480 482 PRINTS E-class P450 group I signature 275 292 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1480 482 PRINTS P450 superfamily signature 416 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1480 482 PRINTS P450 superfamily signature 286 303 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1480 482 PRINTS P450 superfamily signature 425 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1480 482 PRINTS P450 superfamily signature 338 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1480 482 PANTHER CYTOCHROME P450 78A7-RELATED 2 479 - -
Ssu2g1480 482 SUPERFAMILY Cytochrome P450 24 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1480 482 PANTHER CYTOCHROME P450 78A5 2 479 - -
Ssu2g1480 482 Pfam Cytochrome P450 36 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1480 Ssu-Chr2 61541242 61543065 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1480 2 479 Cytochrome P450 AT1G13710 66.803 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1480 K20619 - gmx:100783602 794.653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1480 2 61541242 61543065 Ssu2g1480 2 61541242 61543065 ECH