Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1466 ATGGCGTGTCTTTCTTTTCCCCAGTTTCtctcacttcctagGTACCACTTGACTAGGTACTATTGTTGCACTTCCTTTAACACAGTGCAACTTGGGGAACTTAGGTCTGAGTGTAAAAGGGGTCATGTGGCAATGGCTAGGAAAAAGGCTTCTCTAGCTATAGAAGAGGAACCCAGTGATAGTGAATCTGTGGTGGAAAAGAAGACAACTAGGTCATCTAAAACTAAGAAGGCAATGGCGAGGACgaggaagaaaacaaaagatgaGTCTCCTGAAGGGAAGGCTGATTTGTCGGTAGATAGAGATGTTGCCTCCATTGGAGAAAGCTCATCTGCCTGTAGTGATGATTCCAAGAAAATTCGAAGGACTCGGAGAAAGGATGCATCTAATTCTGCTGGcttgaaagaaaagaaggaactCAAGGAAGACAAAAAGGTTAGAAGACGAAGGAAAACTGAAGAGGAGAATTTAGTTGTAGATGATAAAGGTAGCGAAGCTGAAATCAGTGACCAAGATGAGCCTTCATTTCTTGAAAATGTGGAGAATGAGAGTGACAGTGGCTTGGAACTGGTAAAAGATGATGGAGAGGACATTAGCTTCACTTATGGATGGCCTCCTCTTGTTTGTTGCTTTGGAGCTGCACAGCATGCTTTTGTGCCTTCAGGGAGACCCGCCAATAGGCTTATAAATCATGAAATCCATGAAAGCATGAAGGATACCCTATGGAGCCCTGATAAATTTGTAAGGGCTCCTGGGGGCTCTGCTGGTAGTGTTGCCATTGCTCTTGCTACCTTGGGTGGCAAGGTTGCTTTCATGGGAAAACTTGCGGATGATGATTATGGTCAAGCAATGCTGTACTATATGAATGCAAATAATGTTCAAACCCGATCAGTACGTATTGATAGTAAATGGGCTACAGCTGTATCATTGATGAAGATTGGTAAAAGGAGTCGACTTAAAATGAGTTGTGTAAAACCCTGTGCTGAAGATAGTTTGACGAAGTCGGAGCTAAATATTGATGTGCTGAAACAGGCAAAAATGTTCTACTTCAATACCCATTCCCTGCTTGATCGTAACATGAGGTCAACTACATTGCAAGCCATCAAGATTTCAAAGCATTTTGGAGGGGTTGTTTTCTATGATCTAAACCTTCCTATGCCACTATGGCACTCTAGGGAAGAAACTGTGACGTTTATTCAGCGAGTGTGGAATCTTGTGGACATTATTGAGGTCACTAAGCAAGAACTGGAGTTCTTATGTGGGATCACACCATCTGAAGAATTTGACACCAAAAATAATGCCAAGTCAAAGTTTGTCCATTATGAACCTGAAGTGGTTGCCCCACTTTGGCACGAAAATCTTAAGGTTTTATTTGTGACTAATGGAACTTCCAAGATACATTACTACACAAAGGAGTTCGATGGTGCTGTTCTTGGGATGGAGGATGCCCCAATTACCCCATTCACTTCTGATATGTCAGCATCTGGAGATGGCATTGTTGCAGCCCTCATGCGATTGTTGACAGTTCAACCTGATTTGATAACTGATAAAGGATACCTGGAACATTCCATCAAGTATGCAATTGATTGTGGGGTTATCGATCAATGGATACTCGGTCGAGTACGGGGCTTTCCTCCACGTGAAGATATGGAGGACATAACTCCTGATCCAAATGGCATTAGGTCAATTTCAGAAACAGAATACCGCACAGTAGTAGGGTCTGTTAGTGAGTAA 1734 0.4146 MACLSFPQFLSLPRYHLTRYYCCTSFNTVQLGELRSECKRGHVAMARKKASLAIEEEPSDSESVVEKKTTRSSKTKKAMARTRKKTKDESPEGKADLSVDRDVASIGESSSACSDDSKKIRRTRRKDASNSAGLKEKKELKEDKKVRRRRKTEEENLVVDDKGSEAEISDQDEPSFLENVENESDSGLELVKDDGEDISFTYGWPPLVCCFGAAQHAFVPSGRPANRLINHEIHESMKDTLWSPDKFVRAPGGSAGSVAIALATLGGKVAFMGKLADDDYGQAMLYYMNANNVQTRSVRIDSKWATAVSLMKIGKRSRLKMSCVKPCAEDSLTKSELNIDVLKQAKMFYFNTHSLLDRNMRSTTLQAIKISKHFGGVVFYDLNLPMPLWHSREETVTFIQRVWNLVDIIEVTKQELEFLCGITPSEEFDTKNNAKSKFVHYEPEVVAPLWHENLKVLFVTNGTSKIHYYTKEFDGAVLGMEDAPITPFTSDMSASGDGIVAALMRLLTVQPDLITDKGYLEHSIKYAIDCGVIDQWILGRVRGFPPREDMEDITPDPNGIRSISETEYRTVVGSVSE 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1466 577 CDD bac_FRK 207 541 - -
Ssu2g1466 577 Pfam pfkB family carbohydrate kinase 239 530 IPR011611 -
Ssu2g1466 577 Gene3D - 208 557 IPR029056 -
Ssu2g1466 577 SUPERFAMILY Ribokinase-like 236 552 IPR029056 -
Ssu2g1466 577 PANTHER HEXOKINASE FAMILY MEMBER 97 572 - -
Ssu2g1466 577 Coils Coil 134 154 - -
Ssu2g1466 577 MobiDBLite consensus disorder prediction 54 172 - -
Ssu2g1466 577 MobiDBLite consensus disorder prediction 114 169 - -
Ssu2g1466 577 PANTHER FRUCTOKINASE-LIKE 2, CHLOROPLASTIC 97 572 - -
Ssu2g1466 577 MobiDBLite consensus disorder prediction 54 73 - -
Ssu2g1466 577 MobiDBLite consensus disorder prediction 82 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1466 Ssu-Chr2 60792594 60796240 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1466 - - gmx:100786248 965.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1466 2 60792594 60796240 Ssu2g1466 2 60792594 60796240 ECH