Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1464 ATGAGGAAATCGGGCATTAACATCACAAGACATGCTTGTTTGTATGAGACAGCACCGGCATATGTTACTGATCAACCTCGCTTTATCAACTCTACAATTAGAGGTGTTACTAAACTCGGCCCACATGAATTGTTGTCTACACTCAAAAGAATTGAGAAGGACTTGGGCCGTAAAGATGGTATAAGGTATGGTCCAAGGCCAATTGACTTAGACATTTTATTCTATGGTAAATATAAAGTCAGATCTGATATCCTCACTATACCTCATGAAAGAATTTGGGAAAGGCCATTTGTTATGGCTCCCTTGATGGATTTATTGGGATCAGCTATAGACAGTGACACAGTTGCTGCCTGGCATTCATTTTCAGGCCATTCTGGTGGACTCTCTGGATTATGGGATGACTTGGGAAGTGAATCCCTTATTGGAGAGGAAGGTATGTATAGGGTAATGCCTGTTGCAAATGGCTTACTTGACTGGTCGCCTAGAACTTCTATCATGGGGATCCTTAATGTGACTCCAGATAGTTTTAGTGATGGGGGAAATTTCCTGTCTGTGGAGTCTGCTGTTTCTCAGGTTCGGTTAATGATTTCAGAAGGAGCAGATATGAGTCGGGCTCAGTCTACTCGGCCAATGGCATCTAGGATCTCTGTTGAAGAAGAATTAGATAGATTAATCCCTGTCCTGGAAGCTGTAATGTCAATGCCTGAGGTAGAAGGAAAGCTCATATCTGTGGATACTTTCTACTCTAAAGTTGCTTCAGAAGCAGTGAGTAAAGGGGCTCATCTTATAAATGATGTATCTGCTGGACAGTTAGACAGTTATATGTTTAAGGTCATGGCAGATCTTGATGTTCCTTATGTTGCAATGCACATGAGGGGGGACCCATCTACAATGCAGAATAGTGAAAACCTGAAATATGATAATGTGTGCGAAGAGATATCATCAGAATTATACTTACGTATTAGAGAGGCTGAAATGTCAGGAATTCCAGCATGGAGGATTATCATTGATCCTGGCTTTGGATTCTCAAAGAAAACTGAAGACAATTTAGACATCCTCATGGGACGACCTGATATCAGAGAAGAGATTGCCACAAGAAGTTTGGCCATCTCTCACGCTTCCATGCTAATTGGACCCTCAAGAAAGAGATTTTTAGGTGAAATTTGCTCTCTTCCCTCCTCAGCTGAGAGGGATCATGCTACCATTGCTTCTGTCACAGCTGGTGTTTTGGGAGGGGCGGCTAATATTGTTAGGGTGCATAATGTCAAAGATAATCTAGATGCCGCGAAGCTTTGTGATGCAATTCTAAGATAG 1314 0.4201 MRKSGINITRHACLYETAPAYVTDQPRFINSTIRGVTKLGPHELLSTLKRIEKDLGRKDGIRYGPRPIDLDILFYGKYKVRSDILTIPHERIWERPFVMAPLMDLLGSAIDSDTVAAWHSFSGHSGGLSGLWDDLGSESLIGEEGMYRVMPVANGLLDWSPRTSIMGILNVTPDSFSDGGNFLSVESAVSQVRLMISEGADMSRAQSTRPMASRISVEEELDRLIPVLEAVMSMPEVEGKLISVDTFYSKVASEAVSKGAHLINDVSAGQLDSYMFKVMADLDVPYVAMHMRGDPSTMQNSENLKYDNVCEEISSELYLRIREAEMSGIPAWRIIIDPGFGFSKKTEDNLDILMGRPDIREEIATRSLAISHASMLIGPSRKRFLGEICSLPSSAERDHATIASVTAGVLGGAANIVRVHNVKDNLDAAKLCDAILR 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1464 437 PANTHER FOLATE SYNTHESIS PROTEINS 1 436 IPR045031 GO:0004156|GO:0009396
Ssu2g1464 437 SUPERFAMILY Dihydropteroate synthetase-like 153 437 IPR011005 GO:0044237
Ssu2g1464 437 SUPERFAMILY 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK 5 110 IPR035907 -
Ssu2g1464 437 TIGRFAM folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 5 105 IPR000550 GO:0003848|GO:0009396
Ssu2g1464 437 CDD DHPS 163 433 IPR006390 GO:0004156|GO:0009396
Ssu2g1464 437 ProSitePatterns 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 62 73 IPR000550 GO:0003848|GO:0009396
Ssu2g1464 437 ProSiteProfiles Pterin-binding domain profile. 163 430 IPR000489 GO:0042558
Ssu2g1464 437 PANTHER FOLIC ACID SYNTHESIS PROTEIN FOL1 1 436 - -
Ssu2g1464 437 Pfam 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 8 105 IPR000550 GO:0003848|GO:0009396
Ssu2g1464 437 Gene3D - 146 437 IPR011005 GO:0044237
Ssu2g1464 437 CDD HPPK 4 105 IPR000550 GO:0003848|GO:0009396
Ssu2g1464 437 Pfam Pterin binding enzyme 166 420 IPR000489 GO:0042558
Ssu2g1464 437 Gene3D - 1 121 IPR035907 -
Ssu2g1464 437 TIGRFAM DHPS: dihydropteroate synthase 165 434 IPR006390 GO:0004156|GO:0009396
Ssu2g1464 437 ProSitePatterns Dihydropteroate synthase signature 1. 165 180 IPR000489 GO:0042558
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1464 Ssu-Chr2 60723127 60724440 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1464 K13941 - gmx:100808899 743.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1464 2 60723127 60724440 Ssu2g1464 2 60723127 60724440 ECH