Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1463 ATGAATCCCAAAATATCAGATTTTGGATTGGCAAGGGCATTTGAAAGAGGACAGAACCAGGCAAATACAAAACGAGTAATGGGCACTTATGGATACATGGCTCCTGAGTATGCTATGGAAGGATTATTTTCAGTGAAATCTGATGCTTTCAGCTTTGGAGTTCTTGTTCTAGAAATTATTTGTGGGAAAAAGAATAGTGGATTCTATCTATCAGAATATGGTCAAAGTCTTATTTTATATGCTTGGACAATATGGTGTGCAGGAAAATGTTTGGAATTGATCGATCCATTGCTGGAAAAATCCTTCATAGGCAGTGAAGTTGAGAGGTGCATACACATTAGTTTGTTGTGTGTTCAAGAAGATACAACAGATAGACCAACCATGTCCGATGTTGTTGTAATGCTGGCGAGTGATACAATAGCCTTTCCAAAATCCAAGCACCCAGCATTTTCAATTGGAAGAATAGCCTCAGAGGAAGTTTCTACTTCAAAAAGTTCCATTAATAATGCAACATTCTCCATTACTTTACCAAGGTAA 537 0.3743 MNPKISDFGLARAFERGQNQANTKRVMGTYGYMAPEYAMEGLFSVKSDAFSFGVLVLEIICGKKNSGFYLSEYGQSLILYAWTIWCAGKCLELIDPLLEKSFIGSEVERCIHISLLCVQEDTTDRPTMSDVVVMLASDTIAFPKSKHPAFSIGRIASEEVSTSKSSINNATFSITLPR 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1463 178 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 169 - -
Ssu2g1463 178 Pfam Protein tyrosine and serine/threonine kinase 4 134 IPR001245 GO:0004672|GO:0006468
Ssu2g1463 178 Gene3D Transferase(Phosphotransferase) domain 1 1 147 - -
Ssu2g1463 178 SUPERFAMILY Protein kinase-like (PK-like) 2 164 IPR011009 -
Ssu2g1463 178 ProSiteProfiles Protein kinase domain profile. 1 150 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu2g1463 178 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 1 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1463 Ssu-Chr2 60656821 60657586 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1463 1 178 Receptor kinase-like Gene Family AT4G23150 50.802 4.15e-60 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ssu2g1463 PK_Tyr_Ser-Thr 2.2e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1463 - - pvu:PHAVU_011G194500g 288.115