Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1454 ATGCCAACAATCACCAATTTCTACGCCATTGAAGATTTATCGCAGCACAGCACCAAAGACGATTGCTGGATCCTCGTTGATGGAAAGGTATATGATGTGACACAATACTTGGATGATCATCCTGGTGGAGATGATGTAATCCTTGCCGCAACCGGGAAAGATGCAACAGAAGAATTTGAAGATGCTGGCCACAGCAAAAGTGCCAGAGAACTTATGGAGCAGTATTGCATTGGTGAGCTTGACACATCATCTCCAGTTTCCACCAAGCAACGTTATTCTGAAAAGTTCATGCAGCTGACAAAGCAATATTGGGTTATTCCGGTAACCGTCGTTGGTATCTCAGTGGTAGTTGGTTTCATATATTTGCGTAAGAAGTAG 378 0.4339 MPTITNFYAIEDLSQHSTKDDCWILVDGKVYDVTQYLDDHPGGDDVILAATGKDATEEFEDAGHSKSARELMEQYCIGELDTSSPVSTKQRYSEKFMQLTKQYWVIPVTVVGISVVVGFIYLRKK 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1454 125 PANTHER CYTOCHROME B5 ISOFORM A 3 124 - -
Ssu2g1454 125 Gene3D - 3 85 IPR036400 -
Ssu2g1454 125 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Ssu2g1454 125 SMART Cyt_b5_2 8 81 IPR001199 -
Ssu2g1454 125 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Ssu2g1454 125 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Ssu2g1454 125 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Ssu2g1454 125 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Ssu2g1454 125 PANTHER CYTOCHROME B5 3 124 - -
Ssu2g1454 125 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Ssu2g1454 125 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 5 92 IPR036400 -
Ssu2g1454 125 Pfam Cytochrome b5-like Heme/Steroid binding domain 11 80 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1454 Ssu-Chr2 60241879 60248079 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1454 1 124 NADPH P450 reductases AT1G26340 54.478 2.61e-52 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1454 K23490 - gmx:100500537 219.164
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1454 2 60241879 60248079 Ssu2g1454 2 60241879 60248079 ECH