Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1453 ATGTCAATACCAGAACTAGTGTATTGTGTACTGGCTTTGGCGTTTTGTGCACTCTTTGTATTGCTGAAGTGGAATGAGGTAAGGTACAGTAGGAAAGGAATGCCACCAGGAACTATGGGCTGGCCTATTTTTGGTGAGACTGCAGGGTTTCTCAAACAAGGGCCAGATTTCATGAAGTGCAAGAGAGCAAGGTATGGAAATCTCTTCAAGTCTCACGCATTAGGCTCTCCTGTTGTTATAAGCATGGATCCAGAACTCAACAGATACATCCTTAAGAATGAAGCAAAAGGTCTTGTTCCTGGCTACCCTGTGTCCATGAAGAATATACTAGGGAATAGCAACATTGCTGAAGTGCATGGTGCTCTTCATAAACGTATTAGAGGGTCAATATTATCATTCATTGGTCCAGCTGCAATTAGAGACCATCTTTTGCCAGAAGTTGACAAGTTTATGCGGTCTTTCCTTGAGAATTGGGCTGGTAAAACCATTGATATACAACAAAAGACCAAACagATGGCATTCTTTGTTTCAATGAAACTGATTGTAGAAAATGAACCAAGCCCTTTCCATGAGGCCTTTAAAGCCACATTTGACAACATTGTGTCAGGAACATTTTCTCTGCCTATTAAAATTCCTGGCACCAATTACTTTCGAGGACTCCAGACAAGGAAAAAAGTGGTTGCAACACTGAAAGAGATTTTAGCCAAGAGAAGAGCTTCTTTGGCTACTCATGCTGACATTCTTGATCAGCTTATGAGAAATGCGGATTTCAAACATAAACTTAGTGATgaagaaattattgatcaaataaTCACATTCTTATACTCTGGCTATGAAACTGTATCTACTACTACAATGATGGCCGTCAAATATCTTCATGATAATCCTAGAGTTCTTGAAGAAGTCAGGGAAGAGCATTTTGCAATCCAACAAAGTAAAAGACCAAAAGATTTAATAAGCTGGGATGATTATAAGCTCATGGTTAATACACGTGGGGTGATTTTTGAAACCTTGAGATTTGCTAACATTGTTAATGGTGTATTGAGGAAGGCCACCACAGATGTTGAACTGAATGGCTTTATGATTCCCAAGGGATGGAGAGTTTATGTTTACACAAGGGAGACCAACTTTGATCCCTTCCTCTATCAAGAACCTTTTACTTTTAATCCATGGAGATGGCTGGAGAAAGGCTTGGAGTCTCATAATCACAACATGCTGTTTGGAGCAGGAGGCAGGGTGTGTCCCGGAAAGGAATGGGGCATGCTTAAAATCAGCCTTTTCCTTCACTACTTTGTGACTAGATACAGGTGGGAAGAAGCAAAGGGAAACAAACTTATGAAATTCCCTAGAGTGTTGGCAATAGAAGGACTACACATAAGGATCACAAAGCCTAAGCCTATTTCTTTCATTGAAGGGGTCATAGGGCTTGTTGGGCGGATAGCCCTTTCTCAAGAGTCACAGACCCTTGGTCATGCTGCTGGAAAGGAAATAAGGGAAAAAATGGAGACACGACTAGACGACCTAACGGAGAGGCAAAGACGAGGCAATCCACAGCAAACCCTGTCGCAGCGGCGCGTCATCATCACGAGGATCGACGACTTTGGTGGTTTTGAATCGCGAATCCGTAATGGCATATATGTTGCTCTCCGGTGA 1653 0.4156 MSIPELVYCVLALAFCALFVLLKWNEVRYSRKGMPPGTMGWPIFGETAGFLKQGPDFMKCKRARYGNLFKSHALGSPVVISMDPELNRYILKNEAKGLVPGYPVSMKNILGNSNIAEVHGALHKRIRGSILSFIGPAAIRDHLLPEVDKFMRSFLENWAGKTIDIQQKTKQMAFFVSMKLIVENEPSPFHEAFKATFDNIVSGTFSLPIKIPGTNYFRGLQTRKKVVATLKEILAKRRASLATHADILDQLMRNADFKHKLSDEEIIDQIITFLYSGYETVSTTTMMAVKYLHDNPRVLEEVREEHFAIQQSKRPKDLISWDDYKLMVNTRGVIFETLRFANIVNGVLRKATTDVELNGFMIPKGWRVYVYTRETNFDPFLYQEPFTFNPWRWLEKGLESHNHNMLFGAGGRVCPGKEWGMLKISLFLHYFVTRYRWEEAKGNKLMKFPRVLAIEGLHIRITKPKPISFIEGVIGLVGRIALSQESQTLGHAAGKEIREKMETRLDDLTERQRRGNPQQTLSQRRVIITRIDDFGGFESRIRNGIYVALR 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1453 550 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 407 416 IPR017972 GO:0005506|GO:0016705
Ssu2g1453 550 PRINTS E-class P450 group I signature 331 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1453 550 PRINTS E-class P450 group I signature 414 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1453 550 PRINTS E-class P450 group I signature 371 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1453 550 PRINTS E-class P450 group I signature 404 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1453 550 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1453 550 PRINTS E-class P450 group I signature 265 282 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1453 550 SUPERFAMILY Cytochrome P450 28 461 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1453 550 PRINTS P450 superfamily signature 276 293 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1453 550 PRINTS P450 superfamily signature 332 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1453 550 PRINTS P450 superfamily signature 414 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1453 550 PRINTS P450 superfamily signature 405 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1453 550 Gene3D Cytochrome P450 25 462 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1453 550 PANTHER CYTOCHROME P450 85A-LIKE 10 462 - -
Ssu2g1453 550 PANTHER CYTOCHROME P450 26 10 462 - -
Ssu2g1453 550 Pfam Cytochrome P450 35 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1453 Ssu-Chr2 60131251 60214652 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1453 82 462 Cytochrome P450 AT5G38970 56.806 9.61e-161 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1453 K09590 - gmx:100818004 723.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1453 2 60131251 60214652 Ssu2g1453 2 60131251 60214652 ECH