Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1441 ATGTCATGGTGCGGTCTTGTTGGTCACACTCCTGATCAAATTGAAAAGGCAAAGAAGTCATCACTTTGCactcatttttcaatgagagagataaaagtgGCAACAAATGACTTCGATGAGGCTTTACTTACAGGCACTGGTGGATTTGGCAGTGTTTACAAGGGTAGCTTTGATGGTGGTGCAACTTATGTGGCCATAAAACGTGCCAATCCAATGTCAGAGCAAGGTGTTTCAGAATTTGAGACAGAGATCCTTTGGCTCTCACAACTTAGGCATAACAACCTAGTCTCTCTTTTGGGTTATTGCAATGAAGATGGGGAGATGATACTGGGCTATTCAGATTTGACACCTGGGGTAGAGTTCTCTGAAATCATGATGCCTGTTGtTGTGGTCGCAGTTTCGTTTCAATTCTTGACATTGTTGGAAATTGCGGAAAAATGCAGCTGCAATTGCAATGGCTATGCAGTTGCGGTTCCTGTTCCTTACCTTGGGCACCAGCaacctttatttattaatgatgaATATGCTCTTGAGATGCTTTACCGTGTTAGCATCGGTAATGAAAATGCTATTGTAGAAAATGCTTTTGGAACATGGTTGGATGATTTTCGATACATATCTGGTTCACAATCTGGAAGTGTCCTTAGTATAAAGCCTCGTCCCAGGTCGTCGTCACTAATAGTGGGGAAGGGAAAAGTGAAGACAGAGATGATTTCCACAGCCTTGGAGAGCTCGCTGGAGAGTCCCTTGAGGGAGCAAAGTGGCAAAAAGAGGAGGTGTGAGAGGCGGCACAACAAATGA 801 0.4182 MSWCGLVGHTPDQIEKAKKSSLCTHFSMREIKVATNDFDEALLTGTGGFGSVYKGSFDGGATYVAIKRANPMSEQGVSEFETEILWLSQLRHNNLVSLLGYCNEDGEMILGYSDLTPGVEFSEIMMPVVVVAVSFQFLTLLEIAEKCSCNCNGYAVAVPVPYLGHQQPLFINDEYALEMLYRVSIGNENAIVENAFGTWLDDFRYISGSQSGSVLSIKPRPRSSSLIVGKGKVKTEMISTALESSLESPLREQSGKKRRCERRHNK 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1441 266 ProSiteProfiles Protein kinase domain profile. 38 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu2g1441 266 PANTHER OS07G0166700 PROTEIN 8 112 IPR045272 GO:0004714|GO:0006468
Ssu2g1441 266 PANTHER FERONIA RECEPTOR-LIKE KINASE 8 112 - -
Ssu2g1441 266 MobiDBLite consensus disorder prediction 244 266 - -
Ssu2g1441 266 SUPERFAMILY Protein kinase-like (PK-like) 21 122 IPR011009 -
Ssu2g1441 266 Pfam Protein tyrosine and serine/threonine kinase 45 109 IPR001245 GO:0004672|GO:0006468
Ssu2g1441 266 Gene3D Phosphorylase Kinase; domain 1 7 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1441 Ssu-Chr2 59773345 59782649 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1441 20 119 Receptor kinase-like Gene Family AT3G51550 63.000 6.65e-35 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Ssu2g1441 PK_Tyr_Ser-Thr 3.7e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1441 - - gmx:100776859 207.608