Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1440 ATGTCATGGTGCGGTCTTGCTGTCCACACTCCAAGTCAAATTGAAAAGGCAAAGAAGTCATCACTTTGCACTCATTTTTCAATGGGAGAGATAAAAATGGCAACAAATGACTTCGATGAGGCTCTACTTATAGGCACTGGTGGATTTGGCAGTGTATACAAAGGTAGCTTTGACAGTGGGGCAACTTCTGTAGCCATAAAACGTGCCAATCCAATGTCAGAGCAAGGTGTTTCAGAATTTGAGACAGAGATCCTTTGGCTCTCACAACTTAGGCATAACAACCTAGTCTCTCTTTTGGGTTATTGCAATGAAGATGGGGAGATGATACTGGGCTATTCAGATTTGACACCTGGGGTAGAGTTCTCTGAAATCATGATGCCTGTTGGTCGGTGA 393 0.4351 MSWCGLAVHTPSQIEKAKKSSLCTHFSMGEIKMATNDFDEALLIGTGGFGSVYKGSFDSGATSVAIKRANPMSEQGVSEFETEILWLSQLRHNNLVSLLGYCNEDGEMILGYSDLTPGVEFSEIMMPVGR 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1440 130 ProSiteProfiles Protein kinase domain profile. 38 130 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu2g1440 130 SUPERFAMILY Protein kinase-like (PK-like) 20 118 IPR011009 -
Ssu2g1440 130 PANTHER OS07G0166700 PROTEIN 5 112 IPR045272 GO:0004714|GO:0006468
Ssu2g1440 130 PANTHER FERONIA RECEPTOR-LIKE KINASE 5 112 - -
Ssu2g1440 130 Pfam Protein tyrosine and serine/threonine kinase 44 109 IPR001245 GO:0004672|GO:0006468
Ssu2g1440 130 ProSitePatterns Protein kinases ATP-binding region signature. 44 67 IPR017441 GO:0005524
Ssu2g1440 130 Gene3D Phosphorylase Kinase; domain 1 5 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1440 Ssu-Chr2 59752572 59753639 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1440 20 119 Receptor kinase-like Gene Family AT3G51550 62.000 4.46e-37 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Ssu2g1440 PK_Tyr_Ser-Thr 5.7e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1440 - - gmx:100776859 209.92