Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1439 ATGGAAAACTTACACAGATTGAATGTAGGAGGTGAGCAAATTCCACCCAAATATGACACGGGCATGTTTCGCACTTGGAACACAGACGATGCTAACATTTTAGGGGCTAATATTGGTATTGAACCCTCCAATATGAGCATGCCAGTTTTGTATACTGATAATGCTCCACCATATTCAGCCCCAGCAGATGTCTACCGCACATCCCGTTCAATGCTAAAGGTGACTAGGCCAAGAAGGGTCATGTCATGGTGCGGTCTTGCTGTCCACACTCCAAGTCAAATTGAAAAGGCAAAGAAGTCATCACTTTGCACTCATTTTTCAATGGGAGAGATAAAAATGGCAACGAATGACTTCGATGAGGCTCTACTTATAGGCACTGGTGGATTTGGCAGTGTATACAAAGGTAGCTTTGACAGTGGGGCAACTTCTGTAGCCATAAAACGTGCCAATCCAATGTCAGAGCAAGGTGTTTCAGAATTTGAGACAGAGATCCTTTGGCTCTCACAACTTAGGCATAACAACCTAGTCTCTCTTTTGGGTTATTGCAATGAAGATGGGGAGATGATACTGGGCTATTCAGATTTGACACCTGGGGTAGAGTTCTCTGAAATCATGATGCCTGTTGGTCGGTGA 633 0.4408 MENLHRLNVGGEQIPPKYDTGMFRTWNTDDANILGANIGIEPSNMSMPVLYTDNAPPYSAPADVYRTSRSMLKVTRPRRVMSWCGLAVHTPSQIEKAKKSSLCTHFSMGEIKMATNDFDEALLIGTGGFGSVYKGSFDSGATSVAIKRANPMSEQGVSEFETEILWLSQLRHNNLVSLLGYCNEDGEMILGYSDLTPGVEFSEIMMPVGR 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1439 210 PANTHER OS07G0166700 PROTEIN 78 192 IPR045272 GO:0004714|GO:0006468
Ssu2g1439 210 PANTHER FERONIA RECEPTOR-LIKE KINASE 1 77 - -
Ssu2g1439 210 PANTHER OS07G0166700 PROTEIN 1 77 IPR045272 GO:0004714|GO:0006468
Ssu2g1439 210 PANTHER FERONIA RECEPTOR-LIKE KINASE 78 192 - -
Ssu2g1439 210 ProSiteProfiles Protein kinase domain profile. 118 210 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu2g1439 210 SUPERFAMILY Protein kinase-like (PK-like) 100 198 IPR011009 -
Ssu2g1439 210 ProSitePatterns Protein kinases ATP-binding region signature. 124 147 IPR017441 GO:0005524
Ssu2g1439 210 Pfam Protein tyrosine and serine/threonine kinase 124 189 IPR001245 GO:0004672|GO:0006468
Ssu2g1439 210 Gene3D Phosphorylase Kinase; domain 1 83 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1439 Ssu-Chr2 59727270 59729114 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1439 1 71 Receptor kinase-like Gene Family AT3G51550 48.611 6.45e-16 73.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Ssu2g1439 PK_Tyr_Ser-Thr 1.8e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1439 - - gmx:100776859 223.402