Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1435 ATGGAAAACTTATACAGATTGAATGTAGGAGTTTTGTTTGCAGATAATGCTCCACCATATTCAGCCCCAGCAGATGTCTACCGTACATCCCGTTCAATGGTTTCTTTTGCAGATGGCCTCGTCAATTTAAATCACAATATGACATGGTTTTTTCCAGTTGATTCAGGTTTCTGTTATCTAGTTAGGCTTCACTTCTGTGAAATTCATTACAAGATAACAAAGATCAATGAGGTAGTGTTTGAtgtcattttaaataatcaaacagTTGATGAAGAATTTGATCCAATTGCTGTGAGTTGGGGGGGGAGGGGCGGGGGGGCTGGAGTTGCTGTACACCGAGACTATGTTGTTATGGTTCCCCAAGTTAATGAAGGAAAGCAGGATTTGTGGCTTGATCTACACCCAAACAAGGAGTCTAAACCTAGGTACTATAAGGCTTTCTTGAATGGTGTGGAGATCTTTAAACTGAGCTATTTTGATAAGAATCTTGCAGGGCTCAACCCTTCCAAAAGCTTCAAGTCTGGGTCAGATGTAAAGGCTCCCTACTTTAATAAAAGTTCAAAGAAACTCAAATTTATCCTCATTGGATGTGGACTTGGCGCAGTGGTACTACCAATTCTCCTTTGCTTAGTTCTATGCAGGTTAAAGGTGATTAGGCCTAGAAGGGTCATGTCATGGTGCGGTCTTGCTGTCCACACTCCTAATCAAATTGAAAAGGCAAAGAAGTCATCATTTTGCTGTCACTTTTcaatgagagagataaaagtgGCAACATATAACTTCGATGATGCTCTACTTATAGGCATTGGTGGATTTGGCAATGTTTACAAGGGTAGCTTTGATGGCGGGGTAACTTATGTGGCCATAAAACGTGCCAATCCAATGTCGGAGCAAGGTGTTTCAGAATTTGAGACAGAGATCCTTTTGCTCTCACAACTTAGGCATAACAACCTTGTCTCACTTTTGGGTTATTGCAATGAAGATGGGGAGATGATACTGGTCTATGACTTCATGGCCAATAGAACTTTATGTGATCATCTTCATTTGAGGCAGAGAGATCAACCCCCTTTGTCTTGGATTCAACGTCTCGAGATATGCATTGGAGTTGCAAGGGGTTTGCACTACCTACACACTGGCACAAAGCACAAGATCATCCACTGTGACATCAAGACAACCAACATACTCTTAGATCATAATTGGGTGcccaaaatttcagattttgggTTGTCAAAGGCATGTTACCCTTCCATAATCACAACCAACATCAAGGGTAGTATTGGTTACCTAGATCCTGAGTGCTATCAAAGCCAAAAGTTGACTGAGAAATCTGATTTATACTCACTTGGGGTGGTGTTGTTGGAGGTGCTAAGCTCAAGGCCTGCCGTAAGTcaagatgaagatgatgagcATGTAAACTTGGCTGAATGGGCTATGTTGTGCTTTGAGAATGGCAGAGTAGAGCAAATAGTTGACCCCAACTTGGAAGGAAACATAGTTAAAGAGTGCTTTGAGTTATATTTAGGAGTTGCAATGAAATGTTTGGCTGAAAGAGGGGTGGAGAGGCCATCCATTGGTGAAGTGCTGGAGAACCTTGTTCTGGCCATGCATCTTCAGAAAAATGAAGGAACTGTCCCAGATGGAAATATACATAGAAATGATAATGCTGGTTTGCAGGGCTATTCAGATTTGACACCTGGGGTCGAGTTTTCTGAAATCATGATGCCTATTGGTCGGTGA 1737 0.4013 MENLYRLNVGVLFADNAPPYSAPADVYRTSRSMVSFADGLVNLNHNMTWFFPVDSGFCYLVRLHFCEIHYKITKINEVVFDVILNNQTVDEEFDPIAVSWGGRGGGAGVAVHRDYVVMVPQVNEGKQDLWLDLHPNKESKPRYYKAFLNGVEIFKLSYFDKNLAGLNPSKSFKSGSDVKAPYFNKSSKKLKFILIGCGLGAVVLPILLCLVLCRLKVIRPRRVMSWCGLAVHTPNQIEKAKKSSFCCHFSMREIKVATYNFDDALLIGIGGFGNVYKGSFDGGVTYVAIKRANPMSEQGVSEFETEILLLSQLRHNNLVSLLGYCNEDGEMILVYDFMANRTLCDHLHLRQRDQPPLSWIQRLEICIGVARGLHYLHTGTKHKIIHCDIKTTNILLDHNWVPKISDFGLSKACYPSIITTNIKGSIGYLDPECYQSQKLTEKSDLYSLGVVLLEVLSSRPAVSQDEDDEHVNLAEWAMLCFENGRVEQIVDPNLEGNIVKECFELYLGVAMKCLAERGVERPSIGEVLENLVLAMHLQKNEGTVPDGNIHRNDNAGLQGYSDLTPGVEFSEIMMPIGR 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1435 578 ProSiteProfiles Protein kinase domain profile. 261 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu2g1435 578 SMART serkin_6 261 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu2g1435 578 Pfam Protein kinase domain 266 529 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu2g1435 578 PANTHER FERONIA RECEPTOR-LIKE KINASE 10 578 - -
Ssu2g1435 578 ProSitePatterns Serine/Threonine protein kinases active-site signature. 384 396 IPR008271 GO:0004672|GO:0006468
Ssu2g1435 578 ProSitePatterns Protein kinases ATP-binding region signature. 267 290 IPR017441 GO:0005524
Ssu2g1435 578 Gene3D Transferase(Phosphotransferase) domain 1 338 550 - -
Ssu2g1435 578 Gene3D - 5 157 - -
Ssu2g1435 578 Pfam Malectin-like domain 16 155 IPR024788 -
Ssu2g1435 578 Gene3D Phosphorylase Kinase; domain 1 227 337 - -
Ssu2g1435 578 SUPERFAMILY Protein kinase-like (PK-like) 246 535 IPR011009 -
Ssu2g1435 578 CDD STKc_IRAK 267 531 - -
Ssu2g1435 578 PANTHER OS07G0166700 PROTEIN 10 578 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1435 Ssu-Chr2 59286725 59288575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1435 8 578 Receptor kinase-like Gene Family AT3G51550 46.490 1.71e-180 531
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Ssu2g1435 Pkinase 3.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1435 - - gmx:100776859 925.235