Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1392 ATGGCACCTGCTTCACACAACCGTCAGTTTTCCGTCCTAACCGTAATCATTCTCGTACTGGCCTCAGCAACACTAGCAGTCTCCGCGGAGGAACAATGCAACTCGAAGTACGAGGGAGGGTGCCACGACAAAGCCCAGGCGCTGAAGCTGAAAGTCATAGCCATATTCTGCATACTGGCGACCAGCATGGTCGGGATTTGCCTCCCGATATTCTCCCGTGCGGTTCCCGCGCTGCAACCGGACCGGGACCTCTTCGTCCTCGTCAAGGCCTTTGCTTCGGGTGTGATATTGGCCACCGGCTACATGCACGTGATGCCGGATTCCTTCGACGACCTCACGTCGCCGTGCTTGCCCCAACGCCCCTGGCACAAGTTCCCCTTCACCACCTTCATCGCCATGCTCGCCGCGGTTTTCACTCTCATGATCGATTCCTTCTCGATCAGTTACTTCAAGAAGAAGCTCTCTCCGGTTACGGCTTCCCTCGAAGCCGGCGAGAGCAAGGAAGTGGAACTGCAACGGCATTGTCATGGCCATGTGAATGGACATGATGTGAAGGGCGTGAATGCGGAGCAGTTGCTGCGGTACCGTGTTGTGGCTCAGGTGTTGGAGCTAGGGATTGTGGTGCACTCGGTGGTGATTGGTTTGTCAATGGGAGCTTCGGTGAACCCGTGCACGATTAGGCCTCTCATTGCTGCGCTATGCTTCCATCAAATGTTTGAGGGAATGGGCTTAGGTGGTTGCATACTTCAGGCCGAATATGGATTGAAGGTGAAGGCTATTATGGTTTTCTTCTTCTCTACGACGACGCCGTTTGGGATCGCGCTGGGGATCGGTTTGTCGAACGTGTATAGCGACACGAGTCCAACTTCGCTTATTGTGGAGGGGGTTCTGAACGCGGTATCTGCGGGGCTTCTGAATTATATGGCACTGGTTGAATTATTGGCTTCTGATTTTATGGGGCCTAAGCTACAAGGCTCAATAAAGCTCCAGGTTTGGTCCTATGTGGCAGTTTTGCTAGGCGCAGGGGGCATGTCAGTCATGGCAATATGGGCATAG 1056 0.5388 MAPASHNRQFSVLTVIILVLASATLAVSAEEQCNSKYEGGCHDKAQALKLKVIAIFCILATSMVGICLPIFSRAVPALQPDRDLFVLVKAFASGVILATGYMHVMPDSFDDLTSPCLPQRPWHKFPFTTFIAMLAAVFTLMIDSFSISYFKKKLSPVTASLEAGESKEVELQRHCHGHVNGHDVKGVNAEQLLRYRVVAQVLELGIVVHSVVIGLSMGASVNPCTIRPLIAALCFHQMFEGMGLGGCILQAEYGLKVKAIMVFFFSTTTPFGIALGIGLSNVYSDTSPTSLIVEGVLNAVSAGLLNYMALVELLASDFMGPKLQGSIKLQVWSYVAVLLGAGGMSVMAIWA 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1392 351 Pfam ZIP Zinc transporter 49 348 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Ssu2g1392 351 PANTHER ZINC TRANSPORTER 7 21 351 - -
Ssu2g1392 351 TIGRFAM zip: ZIP zinc/iron transport family 33 351 IPR004698 GO:0005385|GO:0016021|GO:0071577
Ssu2g1392 351 PANTHER ZINC/IRON TRANSPORTER 21 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1392 Ssu-Chr2 58231071 58233760 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1392 29 351 Inorganic Solute Cotransporters AT1G31260 59.104 7.96e-142 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1392 K14709 - gmx:100784872 538.88