Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1391 ATGGTTCCCAGTGAGATCAGAGGAGTCCACTATCTAGCACCTGAAAATCCATTCCTAGTTCCACCCAACTTTGGCCTACTGCAAAATGACATCCCAAACCTCCATCTGAACACCCTCTTAAGCACCTTTCCAAACTGCCACTACCCTCCTTCAGGCCATGAATTTGTTGCTCCTCCCTCTTCATACCTCAGCAGCAACTCAACCTCTGATGAAGCTGATGAAATCCAGTTCAACATCATCGACGAAAGGAAGCACCGGAGAATGATATCTAACCGGGAATCCGCCCGCAGATCAAGGATGAGGAAGCAAAAGCACTTGGATGAGCTGTGGTCTCAGGTTGTTAGACTCAGAACTGAGAACCACAACCTTGTTGACAAACTCAACCATGTGTCTGAGTCCCATGACAGAGTCCTCCAGGAGAATGCTCGCCTCAAGGAAGAAACTTCTGATCTTCGCCAAATGCTAGCAGACATGCAAATTGGAACCTCTTTTGCTTGCACCATGGGGGATTTGGAGGACCTTCCATGCAACACTTCTCAACTCAAACCTGACCCCCCAAACCAATCAATCACTCCTGCAGACATGATTCATGAATGA 597 0.4774 MVPSEIRGVHYLAPENPFLVPPNFGLLQNDIPNLHLNTLLSTFPNCHYPPSGHEFVAPPSSYLSSNSTSDEADEIQFNIIDERKHRRMISNRESARRSRMRKQKHLDELWSQVVRLRTENHNLVDKLNHVSESHDRVLQENARLKEETSDLRQMLADMQIGTSFACTMGDLEDLPCNTSQLKPDPPNQSITPADMIHE 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1391 198 Coils Coil 127 154 - -
Ssu2g1391 198 PANTHER BZIP PROTEIN (ATBZIP48) 1 191 - -
Ssu2g1391 198 Gene3D - 81 136 - -
Ssu2g1391 198 SMART brlzneu 79 143 IPR004827 GO:0003700|GO:0006355
Ssu2g1391 198 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 81 144 IPR004827 GO:0003700|GO:0006355
Ssu2g1391 198 SUPERFAMILY Leucine zipper domain 83 133 IPR046347 GO:0003700|GO:0006355
Ssu2g1391 198 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 191 IPR044521 -
Ssu2g1391 198 MobiDBLite consensus disorder prediction 177 198 - -
Ssu2g1391 198 CDD bZIP_plant_GBF1 84 135 IPR045314 GO:0003700|GO:0006355
Ssu2g1391 198 Pfam bZIP transcription factor 83 141 IPR004827 GO:0003700|GO:0006355
Ssu2g1391 198 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 86 101 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1391 Ssu-Chr2 58121335 58121931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1391 58 171 bZIP Transcription Factor Family AT3G30530 70.085 1.58e-49 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Ssu2g1391 bZIP_1 1.8e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1391 - - gmx:778126 375.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1391 2 58121335 58121931 Ssu2g1391 2 58121335 58121931 ECH