Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1387 ATGAGGAGGATGCGCAGCGTGAGTCGTGCGACGAGGAGAGGCGCGACGTTAGGACGTCTGATGGGCAAGCAGCATGACGCTGCGATGCCGCCACTTGAGACACAGGTGGCGTGCTTGGTCTCGGTGACGAGGAATGGAGGAGaacTTCTTCTATCGATAAAAAATGCTCTTACGTGGCGCCATCTCCGCCCCTCTCCCACCCTCCCTCAGTCTCCGCCTTGCTCCCGCGCGAACCCGCCCCGAAACGTCACCGTCTCGTCGTCCTTTCCCGACTACCCGCTCTCGACCTCCGACGAGGCTCTGGAGTCGCGTGGGTTCGCGCTGCGGCGGGGCGCGGAGGGACTGGACCTGGACGAGCTGAACGCGGTGTTCGTGGCGGTGGGGTTCCCGCGGCGGGACCCGGCGAGGATCCGGGTGGCGCTGGAGCACACGGAGGCGGTGCTGTGGGTGGAGCACCGCAAGACGCGGCGCCCGGTGGCGTTCGCGAGGGCCACCGGCGACGGCGTCTTCAACGCCATCATATGGGACGTCGTCGTCGACCCTTCGTTTCAGGGGATTGGGCTCGGCAAGGCCGTCATCGAGAGGCTGCTGCAGGAGCTCCTGAGGAAGGGAATTTCCAACATTGCCCTCTACTCGGAGCCTCGTGTTCTCGGATTCTATCGCCCGTTGGGGTTCGTTGCTGACCCGGATGGGATCCGGGGAATGGTGTACtccaagaaacaaaagaaaaaaatagaattataa 744 0.6183 MRRMRSVSRATRRGATLGRLMGKQHDAAMPPLETQVACLVSVTRNGGELLLSIKNALTWRHLRPSPTLPQSPPCSRANPPRNVTVSSSFPDYPLSTSDEALESRGFALRRGAEGLDLDELNAVFVAVGFPRRDPARIRVALEHTEAVLWVEHRKTRRPVAFARATGDGVFNAIIWDVVVDPSFQGIGLGKAVIERLLQELLRKGISNIALYSEPRVLGFYRPLGFVADPDGIRGMVYSKKQKKKIEL 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1387 247 MobiDBLite consensus disorder prediction 1 25 - -
Ssu2g1387 247 Gene3D - 111 239 - -
Ssu2g1387 247 Pfam Acetyltransferase (GNAT) family 133 225 IPR000182 GO:0016407
Ssu2g1387 247 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 116 229 IPR016181 -
Ssu2g1387 247 PANTHER N-ALPHA-ACETYLTRANSFERASE NAT5 82 243 - -
Ssu2g1387 247 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 106 243 IPR000182 GO:0016407
Ssu2g1387 247 PANTHER ACYL-COA N-ACYLTRANSFERASE 82 243 IPR045039 GO:0008080
Ssu2g1387 247 CDD NAT_SF 157 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1387 Ssu-Chr2 58084545 58090536 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Ssu2g1387 Acetyltransf_1 3.4e-12 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1387 K22450 - gmx:100778613 290.041