Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1335 ATGGCCCCTCCCTCTCTACTTCCTCTCCTCTTCTTTGCAAGAGTTTCAGGGCTTGCAGTGGCAGTGCTTGTCCTCTTATGGGCCTTTAACTTCAAATCTAGCTTCCTCACTCCCTCAGTTTCCCAACAAGACCTCATCTATGcaGTTCTTCATCCTCTGCTCATGGTCATTGGCTTTATCCTCTTAAGTGGAGAAGCAATTTTGGTGCACAGATGGTTACCTGGGTCTAGGAGCTTGAAGAAATTGGTGCATTTGTGCCTTCAAGGGGTGGCTTTAACTTCTGGTATCTTTGGGATTTGGACAAGATTCCAGGGAAAGGATGGGATTGTGGCAAATTTCTATAGCCTACATTCATGGATGGGTTTGGTTTGTGTATCCCTCTTTGGAGCCCAGTGGTTGATTGGCTTCTTGAACTTTTGGCACCGAGGAGAGGTGCGCACTGTGAGAATACGAATCTTACCATGGCATGTGTTCCTTGGCCTATACACTTATGCATTGGCAATAGCAACAGCGGAAACTGGATTGTTAGAGAAGTTAACATTCTTACAAACAAAGAGAAATGTACCCAAGCACAGCACTGAGTCCATGGTGGTCAATAGTTTAGGCCTGGGTCTTGCCCTCCTCAGTGGCTTTGTTATTTTGGCTGCTGTTTCACCCAAGTATCAAATCCTTGAAAGCAAACTTTTGTACTCGGATTCCAGGTGTTTGTCATCTTAA 717 0.4519 MAPPSLLPLLFFARVSGLAVAVLVLLWAFNFKSSFLTPSVSQQDLIYAVLHPLLMVIGFILLSGEAILVHRWLPGSRSLKKLVHLCLQGVALTSGIFGIWTRFQGKDGIVANFYSLHSWMGLVCVSLFGAQWLIGFLNFWHRGEVRTVRIRILPWHVFLGLYTYALAIATAETGLLEKLTFLQTKRNVPKHSTESMVVNSLGLGLALLSGFVILAAVSPKYQILESKLLYSDSRCLSS 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1335 238 Gene3D - 3 226 - -
Ssu2g1335 238 Pfam Eukaryotic cytochrome b561 50 181 IPR006593 -
Ssu2g1335 238 PANTHER CYTOCHROME B561-RELATED 4 238 IPR043205 GO:0016491
Ssu2g1335 238 ProSiteProfiles Cytochrome b561 domain profile. 12 217 IPR006593 -
Ssu2g1335 238 SMART 561_7 50 175 IPR006593 -
Ssu2g1335 238 PANTHER TRANSMEMBRANE ASCORBATE FERRIREDUCTASE 4-RELATED 4 238 - -
Ssu2g1335 238 CDD Cyt_b561_ACYB-1_like 50 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1335 Ssu-Chr2 56588816 56593623 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1335 4 238 Chloroplast and Mitochondria Gene Families AT1G26100 67.500 1.87e-99 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1335 K08360 - gmx:100781811 399.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1335 2 56588816 56593623 Ssu2g1335 2 56588816 56593623 ECH