Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1307 ATGGTGAGCACTCCCTCCCCCTGCAAAGTGGCAAAGCAAGCTGAGCACTACAAGGAGATGGTGGAGTTCATGGAGAAGGTCTCTGCCGTTGTCGAGAACGAGGAGCTCACTGTGGAGGAGTGCAACCTCCTTTTTGTTGCCTATAAGAATAAGGAGGAGAGCAGGGGCAACGAGGACCATATTGCCATCATCCAAGACTATCACTCCAAGCTTGTGGCCGAACTCTCCAACATCTGTAATGTAGTGCTCAAGCTCCTCAACTCGTGCCTCATCCCCCTCGCCGCCGCCGTTGACCTCCGCGCTGCCCTCAAACACAACCTGTGTCTCGTACTCCCATTATGTCGTGATTGCAAAAGCTATTGTCTTCATGGTGGCACTAGAATTACCCGTGGTTGTCGAGGAAGGACGTTGCTGGTGAAGGCAGTACTGCCGACATTGTCGATGGTCAGAGTAAAGGGAGGGACTGTGAAGGGAGTTGGAGGAAGGATCCAGTGTAAAGGGTGCACCGTATAA 513 0.5263 MVSTPSPCKVAKQAEHYKEMVEFMEKVSAVVENEELTVEECNLLFVAYKNKEESRGNEDHIAIIQDYHSKLVAELSNICNVVLKLLNSCLIPLAAAVDLRAALKHNLCLVLPLCRDCKSYCLHGGTRITRGCRGRTLLVKAVLPTLSMVRVKGGTVKGVGGRIQCKGCTV 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1307 170 Gene3D - 6 121 IPR036815 -
Ssu2g1307 170 PANTHER 14-3-3-LIKE PROTEIN-RELATED 9 96 - -
Ssu2g1307 170 SUPERFAMILY 14-3-3 protein 8 101 IPR036815 -
Ssu2g1307 170 PANTHER 14-3-3 PROTEIN 9 96 IPR000308 -
Ssu2g1307 170 SMART 1433_4 8 167 IPR023410 -
Ssu2g1307 170 Pfam 14-3-3 protein 9 52 IPR023410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1307 Ssu-Chr2 55884966 55885522 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1307 8 98 14-3-3 family AT1G78300 56.481 1.26e-32 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1307 K06630 - tcc:18592122 122.479