Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1215 ATGAATCTGTTAGTTGCTGCCAGTGCTGTAGCTATTCTCGTTTTTTACACGGTGAAaattttttactcaaatttcTGGGTCCCATGGAGAATTCAGCGTCACTTCAAGAAGCAAGGGATAGGAGGCCCTGGCTACCGTCCGATCTTCGGGAACTCATCAGAGATCAGACGGCTCTACGCGGAAGCCAAGTCAGAGCTAACCCCTCCGTTTGACCACGACATCTTGAGACATGTGGTTCCATTTTACCACAGGTGGTCTCGCACGTACGGGAAAACTTTCCTGTACTGGTTCGGTTCTACGCCCCGGTTGGCGGTAACTGACCCGGACATGATTAAGGAGGTGCTCACGAATACGCGTGGGGAGTATGGGAAAGTTCCGTACAACCCTCAATCGAAGTTGCTTTTTGGACTGGGCCTTGTGGGCCTGCAGGGTGACCAATGGGCCTTGCACAGAAGGATTATAAACCTGGCCTTTAACATGGAGCTTGTTAAGGGATGGGTGCCAGATATTGTGGCAATTGTCACAAAGACGCTGGAGAGATGGGAGGACCAAAGAGGAGGAAAAGATGAATTTGAGATAGATGTGCACAGAGACCTTCTTGATCTTTCTGCAGATGTTATATCAAGGACTGCTTTTGGAAGCAGTTATGAAGAGGGCAAACAAACTTTCAACTTACAGGAGCAACAAATGCATCTTTTCACACAGGCAGTTAGAAGTGTCTATATCCCTGGATTTAGATATTTGCCAACTAAGAAGAACAGGGATAGATGGAGACTAGATAAAGAAACACGTGAGTCAATTCTCAAGCTGATTGAGACCAAGAgaaatacaagagaaaaagCAAGAAATGTACTAAGTTCTTTGATGTGTTCCTACAAGAATGATGTTGGTGGAGAAGAAAAGTTAGGGGTGGAAGAAATTATAGATGAATGTAAAACCATCTACTTTGCTGGAAAGGAAACAACAGCTAATTTATTAACTTGGACACTTCTTCTATTAGCAAAACATCAGGAATGGCAAAGTAAGGCACGGGAAGAAGTTCTTCGTGTCATTGGGCACAATCGACTTCCTGTTGCAGACAATTTAAATGACCTTAAGATTGTTGGCATGATAATTAATGAAACACTTCGGCTCTATCCTCCAGCAGTAATGCTAATGAGGCAAGCCTCTAAAGATGTGATGCTTGGAAGCATTAATGTTCCTGCTAAGACTCAACTCTACCTGGCATTGACTGCTGTTCATCATGACAGAGAAATCTGGGGAGATGATAGCCATAACTTCAATCCAATGAGATTTAGCGAACCTCGGAAACATTTAGCCGCATTCTTTCCTTTTGGATTAGGCCCTAGAACCTGTGTTGGGCAAAATTTGGCATTGGTTGAGGCAAAGCTGGCTCTTGCTTTGATCATTCAAAGTTACAGTTTTGTGGTATCTCCAAACTATATGCATGCTCCTATACTATTTATCACTTTGCAGCCTCAATATGGTGCACAAATCATTTTCAGAAGGATTTCATATTGA 1521 0.426 MNLLVAASAVAILVFYTVKIFYSNFWVPWRIQRHFKKQGIGGPGYRPIFGNSSEIRRLYAEAKSELTPPFDHDILRHVVPFYHRWSRTYGKTFLYWFGSTPRLAVTDPDMIKEVLTNTRGEYGKVPYNPQSKLLFGLGLVGLQGDQWALHRRIINLAFNMELVKGWVPDIVAIVTKTLERWEDQRGGKDEFEIDVHRDLLDLSADVISRTAFGSSYEEGKQTFNLQEQQMHLFTQAVRSVYIPGFRYLPTKKNRDRWRLDKETRESILKLIETKRNTREKARNVLSSLMCSYKNDVGGEEKLGVEEIIDECKTIYFAGKETTANLLTWTLLLLAKHQEWQSKAREEVLRVIGHNRLPVADNLNDLKIVGMIINETLRLYPPAVMLMRQASKDVMLGSINVPAKTQLYLALTAVHHDREIWGDDSHNFNPMRFSEPRKHLAAFFPFGLGPRTCVGQNLALVEAKLALALIIQSYSFVVSPNYMHAPILFITLQPQYGAQIIFRRISY 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1215 506 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1215 506 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1215 506 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1215 506 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1215 506 SUPERFAMILY Cytochrome P450 74 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1215 506 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1215 506 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1215 506 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1215 506 PRINTS E-class P450 group I signature 86 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1215 506 PRINTS E-class P450 group I signature 202 220 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1215 506 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1215 506 Pfam Cytochrome P450 81 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1215 506 PANTHER CYTOCHROME P450, FAMILY 721, SUBFAMILY A, POLYPEPTIDE 1 10 499 - -
Ssu2g1215 506 Gene3D Cytochrome P450 25 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1215 506 PANTHER CYTOCHROME P450 FAMILY MEMBER 10 499 - -
Ssu2g1215 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1215 Ssu-Chr2 53529771 53534961 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1215 22 505 Cytochrome P450 AT1G75130 57.407 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1215 - - gmx:100775195 890.182