Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1161 ATGGAGTGGGTGAAGAAGCTCAAAGGGAGAAGCTACCAAGTCCATTTCAAGCTAGCTCTAGCATCATCACTAGCATTTTCTGTGGGTGCCGTGGTACCACTACTAGCAACTGCATTCATAAGGAACCATAAGATTAGgcttgttgttgttgctgttgtggcTAGCCTTGCATTGTTGGTATTTGGTGGGATAGGAGCAGTACTTGGAAAAACTCCAGTGACAAAGTCCTGTGTCAGAGTGCTCGTTGGAGGTTGGATGGCTATGACCATAACATTTGGCCTCACCAAGTTATTTGGCTCTGTTGGGCTTTGA 312 0.4231 MEWVKKLKGRSYQVHFKLALASSLAFSVGAVVPLLATAFIRNHKIRLVVVAVVASLALLVFGGIGAVLGKTPVTKSCVRVLVGGWMAMTITFGLTKLFGSVGL 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1161 103 Pfam VIT family 13 95 IPR008217 GO:0005384|GO:0030026
Ssu2g1161 103 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 15 100 IPR008217 GO:0005384|GO:0030026
Ssu2g1161 103 PANTHER VACUOLAR IRON TRANSPORTER-LIKE PROTEIN 15 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1161 Ssu-Chr2 52150628 52150939 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1161 17 103 Nodulin-like Gene Family AT3G43660 60.920 1.88e-31 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1161 K22736 - gmx:100790996 134.035