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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Ssu2g1122
ATGGGTCGTAGTTTGAAGATGCAGAGCCGCCATCCTGTGGCTTTGAGGTTGCATGATCAAATGGGGTCTAAAAGGAAGTACACTTTCATCCAGGCTCATAGAGCTTGGCTTCCAAAGTTTTTGGTGCTGTGGCTTCTGCTAATGGCTTTGATCAGTTGGTGCATCTATAGCAAAATGGATGATGACACTAAAGTCAGAAGGAAAGAGATGTTGGGTAGCCTCTGTGATCAAAGGGCAAGAATGTTGCAAGATCAGTTTAATGTTAGTGTTAACCATGTCCGTGCCCTTGCCATCCTGGTTTCAACCTTCCATTACTACAGATACCCTTCTGCCATTGACCAGGAAACCTTTGTTGAGTACACAGCTAGGACAGCATTTGAACGGCCATTGCTGAGTGGTGTGGCCTATGCACAAAGAGTTGTTAACTCTGAGAGGGAGAGATTTGAGAAAGAACATGGATGGGTTATAAAGACAATGGAAAGAGAGCCTTCACTGGTTAGAGATGAGTATGCGCCCGTGATATTCGCACAAGAAACTGTCTCATATCTTGAGTCTCTTGATATGATGTCTGGGGAGGAGgatcaagaaaacattttaaggGCTAGAGCAACTGGGAAAGCAGTTCTGACTAGCCCTTTCAGGCTGTTGGGTTCTCACCATCTTGGCGTGGTTTTGACATTCCCTGTGTACAAGTCTAAGCTCCCTCGAAAGCCAACAGTGGAAGAACGCATTGAAGCAACAGCAGGATATGTTGGAGGACCCTTTGATGTTGAGTCACTTGTAGAGAATTTACTTGGGCAACTTGCTGGTAACCAAGCAATTTTGGTGAATGTATATGATATCACAAACCATACTGTTCCGCTAATCATGTATGGCAACCAATATGAAGAAGGCGATACGTCTCTTGGCCATGAAAGCGAGCTTGATTTTGGAGATCCATACAGGAAACATCAGATGATATGTAGGTACCGTCAGAAGGCACTGACAAATTGGATAGCTCTTACCACAGCGTTCCTATTCTTTGTGATTCTTCTATTAGTGGGCTACATTTTATACGGTGCTGGGAATCATATTGTCAAAGTCGAAGATGATTTCCATGAAATGCAGGAATTAAAAGTCCGAGCAGAAGCAGCTGATGTTGCCAAGTCCCAGGTGATTTCCCTGGCATATTGTTAG
1176
0.4354
MGRSLKMQSRHPVALRLHDQMGSKRKYTFIQAHRAWLPKFLVLWLLLMALISWCIYSKMDDDTKVRRKEMLGSLCDQRARMLQDQFNVSVNHVRALAILVSTFHYYRYPSAIDQETFVEYTARTAFERPLLSGVAYAQRVVNSERERFEKEHGWVIKTMEREPSLVRDEYAPVIFAQETVSYLESLDMMSGEEDQENILRARATGKAVLTSPFRLLGSHHLGVVLTFPVYKSKLPRKPTVEERIEATAGYVGGPFDVESLVENLLGQLAGNQAILVNVYDITNHTVPLIMYGNQYEEGDTSLGHESELDFGDPYRKHQMICRYRQKALTNWIALTTAFLFFVILLLVGYILYGAGNHIVKVEDDFHEMQELKVRAEAADVAKSQVISLAYC
391
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Ssu2g1122
391
PANTHER
TWO-COMPONENT HISTIDINE KINASE
22
386
-
-
Ssu2g1122
391
SMART
CHASE_2
108
293
IPR006189
-
Ssu2g1122
391
PANTHER
HISTIDINE KINASE 4
22
386
-
-
Ssu2g1122
391
Gene3D
-
59
111
-
-
Ssu2g1122
391
Pfam
CHASE domain
111
291
IPR006189
-
Ssu2g1122
391
Gene3D
CHASE domain
112
327
IPR042240
-
Ssu2g1122
391
ProSiteProfiles
CHASE domain profile.
108
320
IPR006189
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Ssu2g1122
Ssu-Chr2
51249509
51251915
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Ssu2g1122
11
387
Histidine Kinase Gene Family
AT2G01830
75.196
0.0
590
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Ssu2g1122
K14489
-
gmx:100813204
707.212
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