Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1117 ATGCCTCGTGGCTTCCAAGTTCAAGCAACTTCAATTACCATATTTGCCCATTTGTTGTTTATAGCAATAACAACCCTTGTGTTAGTTTGGCTGCTACACTTCCGTGAAGGTGTTGCCTTCAAATCTTCCAACCCAATCAAGATTTTCAATCTGCATCCACTTCTAATGGTAATTGGGTTTATTTTAGTTGGTGGAGAAGCTATCATGACATACAAGTCTGTGCCTGCTAAAAGAAGGTCAGTGAAGGTGGTTCACCTCCTATTGCATCTGATTGCTCTAGTGGCTGGAGTTTTAGGGATTATTGCAGTTTTCAAATCTAAGAAACAGGCGGGTCTTGCTGATATGTATACATTACACTCTTGGCTAGGCATGTCAACAATCTGCCTATTTGGTTTGCAGTATATCTTCGCCTTCTTCGCGTATTTCTTCCCCGGTGCAGAAATGTCTACTAGAGCTACCCTTTTGCCATGGCACAGATTTATGGGCATGGTGATCTTCCTCCTTGCAGTTGGCACAGCTGAGACAGGTTTGGTTGAATATTTCCAGTTTTTAGGCCTTTTCCGCAGCCAAGAGGCACTAATGGTCAACTCAACTGGTTTCTTACTCTTTCTCTTTGTTGTCTTTGTTAGCCTCTCTGTCATTCTACCAAGAAATTACTGA 660 0.4227 MPRGFQVQATSITIFAHLLFIAITTLVLVWLLHFREGVAFKSSNPIKIFNLHPLLMVIGFILVGGEAIMTYKSVPAKRRSVKVVHLLLHLIALVAGVLGIIAVFKSKKQAGLADMYTLHSWLGMSTICLFGLQYIFAFFAYFFPGAEMSTRATLLPWHRFMGMVIFLLAVGTAETGLVEYFQFLGLFRSQEALMVNSTGFLLFLFVVFVSLSVILPRNY 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1117 219 Gene3D - 5 219 - -
Ssu2g1117 219 PANTHER CYTOCHROME B561 FAMILY PROTEIN, EXPRESSED 6 216 - -
Ssu2g1117 219 ProSiteProfiles Cytochrome b561 domain profile. 15 214 IPR006593 -
Ssu2g1117 219 Pfam Eukaryotic cytochrome b561 51 179 IPR006593 -
Ssu2g1117 219 SMART 561_7 51 177 IPR006593 -
Ssu2g1117 219 PANTHER CYTOCHROME B561-RELATED 6 216 IPR043205 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1117 Ssu-Chr2 51135218 51138757 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1117 6 212 Chloroplast and Mitochondria Gene Families AT4G25570 42.180 1.13e-59 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1117 K08360 - gmx:100785824 352.443
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1117 2 51135218 51138757 Ssu2g1117 2 51135218 51138757 ECH