Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1106 ATGACTGTGGATGAAGTGGAAAGTAGCTCTGAGTGGAGCAGAGAGCAGGATAAAGCATTTGAAAATGCATTGGCAAATCATCCGGAGGATGCTTCCGATCGATGGGAGAAGATTGCGGCTGATGTGCCAGGGAAGACTATAGAAGAAATCAAACAGCATTATGAGCTCTTGGTCGAAGATATTAAGCAGATCGAATCTGGTTGCGTGCCTATACCGTCTTATAATTCTTCTTCAGAAGGCTCAGCAAGCCATGCTAGTGATGAAGGGGCTGGCAAGAAGGGCAGCGGTCTTGGGCAATATAACAGTGAGTCTAATCATGGAAGTAAGGCTTCAAGATCTGATCAGGAACGACGAAAGGGTGAGGATGAAGTGATAGTAAACAGAGGGGGAGAAAAGGGGAATCTCTATGTTGAACTGAGTTCTGTTCCAGTTTCCACCAGAGATGGGGAAGATGTGCAGGGAATTAGCAAGACAGCAAAGGAGAGGGTTGAGAGAGATGAGGAAGGACAGTTCAAGAAAGCGACGCAGATGTGCGAGAGAGCTGGTGTAGATGAAttgggggggcgggggggagCGGGGGCGCGGGGGTTCAGAATGGGAGATGAACAAGATGCTGTGGCCGGCAAAAGGCTTGGGCATAGATGCGAAGGGCTTCAAGAAGAGATAGGGTCTGTTTTAGGAAGCAAAAGGCACAATTTATGGCACAAAAATGGGTTAAAAATCCGGGTTTATGTGAACCGGGTTGCGCAACCCAAGCAAAAAATCTCCAATTTCAGGATTGACAAACTTGCATGA 795 0.4579 MTVDEVESSSEWSREQDKAFENALANHPEDASDRWEKIAADVPGKTIEEIKQHYELLVEDIKQIESGCVPIPSYNSSSEGSASHASDEGAGKKGSGLGQYNSESNHGSKASRSDQERRKGEDEVIVNRGGEKGNLYVELSSVPVSTRDGEDVQGISKTAKERVERDEEGQFKKATQMCERAGVDELGGRGGAGARGFRMGDEQDAVAGKRLGHRCEGLQEEIGSVLGSKRHNLWHKNGLKIRVYVNRVAQPKQKISNFRIDKLA 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1106 264 MobiDBLite consensus disorder prediction 109 128 - -
Ssu2g1106 264 Gene3D - 4 71 - -
Ssu2g1106 264 CDD SANT 11 58 IPR001005 -
Ssu2g1106 264 Pfam Myb-like DNA-binding domain 10 54 IPR001005 -
Ssu2g1106 264 PANTHER TRANSCRIPTION FACTOR KUA1 7 120 - -
Ssu2g1106 264 SUPERFAMILY Homeodomain-like 10 66 IPR009057 -
Ssu2g1106 264 PANTHER HOMEODOMAIN-LIKE TRANSCRIPTIONAL REGULATOR-RELATED 7 120 - -
Ssu2g1106 264 SMART sant 8 60 IPR001005 -
Ssu2g1106 264 MobiDBLite consensus disorder prediction 1 37 - -
Ssu2g1106 264 MobiDBLite consensus disorder prediction 8 37 - -
Ssu2g1106 264 MobiDBLite consensus disorder prediction 69 84 - -
Ssu2g1106 264 ProSiteProfiles SANT domain profile. 7 62 IPR017884 -
Ssu2g1106 264 ProSiteProfiles Myb-like domain profile. 4 58 IPR001005 -
Ssu2g1106 264 MobiDBLite consensus disorder prediction 68 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1106 Ssu-Chr2 50895682 50897270 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Ssu2g1106 Myb_DNA-binding 2.6e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1106 - - ccaj:109792793 216.468