Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1063 ATGGGGACACAAAAACCTAATATGTTTGATACACCTTACAAATATATGGTGTCTGAAGATcaggAAACTCTCGACAAACCTTTGCCATCACATTGGACTCCTCCTTCTATTCAGGCTTATAACAATTTTGGGTCTACTCCAACTcccttttttaatcaatatgcAGCTGGTTCTTGCATGCCTCTCTACATGTGGCCAAATCAGGCAAACAGCACACTACTTCAATCTGATGCTCTGCATGATCCCAAGATGCTCTCCAGTAAACCCACAGTAGCTTCTGGGGATGCTGTACTGGCTTTTTCAGAAATAGTACACAGGACTTTTGGTGAGCAAAACCCGAATTCAATCAAAAGATGTGCTAGAAACTTACAACCTAAAAGTTTAATAACTAAGGAATCAAGAGAAAATGGAAGCAAATCTTCAATACTGAAAACCACCAGGGATGGAATGTTGTGCAGTGCAACAAATGGAAACAAGGGATCACCAGATGAAGACCATGACACTAACAATGATTTCCCTTCAACTAAGAAGCAGCAATGTATTTTGATGCTTGAAAATGCAAGTTCAACCAAACTGAATCAGAACTTGGAGACAGGCCTAGATGCATTTGGAACCAATGCTCACCTTGTAAAGTTGGAAAAGgatgaaataagaaaagaaagaaaaagacagTCAAACAGGGAATCGGCTAGGAGATCAAGGATGCGGAAAGAGAAAGAATGTGTAGAACtacataaaaaaatggaaactcTTAAGGATGAAAACTCCATGCTCACACAGAGGCTCAAGAATCTTTCTGAGGAATGTCTGGAGATGTGTAATGAAAATGATGCCATAGAGGAGGAGCTGGTTAAGATGTATGGACCAGAATCAATAGCAGATCTATTGCCCATGAAGCCTGCCTGA 906 0.3775 MGTQKPNMFDTPYKYMVSEDQETLDKPLPSHWTPPSIQAYNNFGSTPTPFFNQYAAGSCMPLYMWPNQANSTLLQSDALHDPKMLSSKPTVASGDAVLAFSEIVHRTFGEQNPNSIKRCARNLQPKSLITKESRENGSKSSILKTTRDGMLCSATNGNKGSPDEDHDTNNDFPSTKKQQCILMLENASSTKLNQNLETGLDAFGTNAHLVKLEKDEIRKERKRQSNRESARRSRMRKEKECVELHKKMETLKDENSMLTQRLKNLSEECLEMCNENDAIEEELVKMYGPESIADLLPMKPA 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1063 301 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 221 236 IPR004827 GO:0003700|GO:0006355
Ssu2g1063 301 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 301 IPR044827 GO:0003700|GO:0006355|GO:0043565
Ssu2g1063 301 PANTHER BZIP TRANSCRIPTION FACTOR 1 301 - -
Ssu2g1063 301 CDD bZIP_plant_GBF1 219 269 IPR045314 GO:0003700|GO:0006355
Ssu2g1063 301 SMART brlzneu 214 278 IPR004827 GO:0003700|GO:0006355
Ssu2g1063 301 SUPERFAMILY Leucine zipper domain 217 272 IPR046347 GO:0003700|GO:0006355
Ssu2g1063 301 MobiDBLite consensus disorder prediction 215 238 - -
Ssu2g1063 301 Pfam bZIP transcription factor 215 275 IPR004827 GO:0003700|GO:0006355
Ssu2g1063 301 MobiDBLite consensus disorder prediction 153 174 - -
Ssu2g1063 301 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 216 268 IPR004827 GO:0003700|GO:0006355
Ssu2g1063 301 Gene3D - 217 274 - -
Ssu2g1063 301 Coils Coil 234 282 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1063 1 295 bZIP Transcription Factor Family AT4G36730 29.653 6.45e-29 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Ssu2g1063 bZIP_1 8.1e-15 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1063 K09060 - gmx:102665715 495.738