Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1062 ATGTTGGACTCAGATTACAATGACAAGTTGGGAGACTTTGGATTGACTCGTACCATTCAGCAGAGAAATGAAACACACCACTCTACAAAGGAAATTGCAGGCACACCAGGGTACATGGCTCCAGAAACCTTTCTCACTGTGGAGACAGATGTGTATGCATTTGGGGTTCTTGTGTTAGAGGTTGTGTGTGGAAGGAGACCAGGAAATGTTTATTCACAAGATGACTACAAGAACAGCATTGTGTATTGGGTGTGGGAGCTATATGGGAAGGGGAAAATAGTTGAGGTGCCTAAGGAAAGACTAGTTATTATGTGGCCTGCTATGCCTCCATCGTTCAAAGAAGCTGAAGATAGCTCCCTCATCCAGGGAACACTCACTCCATTCACTGGCAGATGA 396 0.4495 MLDSDYNDKLGDFGLTRTIQQRNETHHSTKEIAGTPGYMAPETFLTVETDVYAFGVLVLEVVCGRRPGNVYSQDDYKNSIVYWVWELYGKGKIVEVPKERLVIMWPAMPPSFKEAEDSSLIQGTLTPFTGR 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1062 131 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.5-RELATED 1 97 - -
Ssu2g1062 131 ProSiteProfiles Protein kinase domain profile. 1 131 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu2g1062 131 Pfam Protein kinase domain 1 77 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu2g1062 131 PANTHER - 1 97 - -
Ssu2g1062 131 Gene3D Transferase(Phosphotransferase) domain 1 1 124 - -
Ssu2g1062 131 SUPERFAMILY Protein kinase-like (PK-like) 1 94 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1062 Ssu-Chr2 49560666 49561203 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1062 1 101 Receptor kinase-like Gene Family AT5G55830 41.905 1.69e-20 84.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Ssu2g1062 Pkinase 1.4e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1062 - - gmx:100785031 224.172