Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1059 ATGTCCTGGCGCAGACCTGCCAGgaatctggctggtggaggccgtgatgggttgactaaccttagccttgggggttatccggttgggaaaactccaatggtccatgctgatcccatagagccggggcgtattggcaaaactggGCATGGCACACACAGGCCACCACCAATTGCAGCAGTGTGCCATTGGGGACGGGAGATATTCTCCCCTTTGCGTGGACggGACGTCTTTGGTGCCGGAGGTGAGACATCTGCAACTACCATAAATTGGGCAATGGCAGAGATGATAAGGGATCCGAGAGTAATGAAGAAAGCACAAGTTGAGGTGAGAGAGGTATTCAAATTGAAAGGAAGGATTGATGAAATTTGCATCAATGAACTCAAATATTTGAAATCAGTTGTCAAAGAGACCCTAAGGTTACACCCAGCAGCTCCTCTTTTACTTCCAAGAGAATGTGGACAAGCATGTGAGATTAATGGGTATCATATACCAGTCAAAAGTAAGGTAATTGTCAATGCTTGGGCAATTGGAAGAGATCCAAACTATTGGACTGAAGCAGAGAGGTTTCATCCAGAGAGATTCATTGATAGCTCTATTGACTACAAGGGGAGTAATTTTGAGTACATTCCATTTGGTGCTGGAAGAAGAATATGCCCTGGCAGCACATTTGGCTTAGTAAATGTTGAGTTGGTCCTAGCATTTTTGTTGTATCACTTTGATTGGAAGCTTCCAAATGGAATGAAAAGTAAGGACTTGGACATGACTGAGGAATTTGGAGTGACTGTTGGAAGAAAAGATGACCTATACTTGATACCTGTCACTTCTCGTCCTTTCTGGGGAATCGATGCAGAGAGAAGGGAAATAAGCAGTGCAGGCAAAGAAAGCTGA 888 0.3761 MSWRRPARNLAGGGRDGLTNLSLGGYPVGKTPMVHADPIEPGRIGKTGHGTHRPPPIAAVCHWGREIFSPLRGRDVFGAGGETSATTINWAMAEMIRDPRVMKKAQVEVREVFKLKGRIDEICINELKYLKSVVKETLRLHPAAPLLLPRECGQACEINGYHIPVKSKVIVNAWAIGRDPNYWTEAERFHPERFIDSSIDYKGSNFEYIPFGAGRRICPGSTFGLVNVELVLAFLLYHFDWKLPNGMKSKDLDMTEEFGVTVGRKDDLYLIPVTSRPFWGIDAERREISSAGKES 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1059 295 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 211 220 IPR017972 GO:0005506|GO:0016705
Ssu2g1059 295 PRINTS P450 superfamily signature 79 96 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1059 295 PRINTS P450 superfamily signature 132 143 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1059 295 PRINTS P450 superfamily signature 218 229 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1059 295 PRINTS P450 superfamily signature 209 218 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1059 295 SUPERFAMILY Cytochrome P450 75 272 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1059 295 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 74 276 - -
Ssu2g1059 295 PANTHER CYTOCHROME P450 71B11-RELATED 74 276 - -
Ssu2g1059 295 PRINTS E-class P450 group I signature 68 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1059 295 PRINTS E-class P450 group I signature 172 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1059 295 PRINTS E-class P450 group I signature 208 218 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1059 295 PRINTS E-class P450 group I signature 131 149 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1059 295 PRINTS E-class P450 group I signature 88 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1059 295 PRINTS E-class P450 group I signature 218 241 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1059 295 Pfam Cytochrome P450 75 260 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1059 295 Gene3D Cytochrome P450 74 267 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1059 Ssu-Chr2 49423090 49471989 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1059 75 272 Cytochrome P450 AT3G26210 58.291 3.18e-77 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1059 - - gmx:100814157 379.793