Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1058 ATGATAAGGGATCCAAGAGTAATGAAGAAAGCACAAGTTGAGGTGAGAGAGGTATTCAAATTGAAAGGAAGGGTCGATGAAATTTGCAACAATGAACTCAAATATTTGAAATCCGTTGTCAAAGAGACCCTAAGGTTACACCCTCCGGCTCCTCTTTTACTTCCAAGAGAAAGTGGACAGGCATGTGAGATTCGTGGGTATCATATACCAACCAAAAGTAAGGTAATAGTCAATGCTTGGGCAATAGGAAGAGATCCAAACTACTGGACTGAACCAGAGAGATTCATTGATAGCTCTATTGACTACAAAGGGAGTAATTTTGAGTTCATTCCATTTGGTGCTGGAAGAAGAATATGCCCAGGCAGCACCTTTGGTTTAGTAAATGTTGAACTAGCAgttgcatttttgttgtatcaCTTTGATTGGAAGCTTGCAAATGGAATGAAAAGTGAGGACTTGGACATGACCGAGGAATTTGGAGTGAGTGCTACAAGAAAAGATGACCTATACTTGATACCTGTCACTTCTCGTCCTTTCCTGGGAACTGGTGCAGAGAGTAGGGAAGTACGCAGTGCAGGCAAAGAAGGCTGA 591 0.4078 MIRDPRVMKKAQVEVREVFKLKGRVDEICNNELKYLKSVVKETLRLHPPAPLLLPRESGQACEIRGYHIPTKSKVIVNAWAIGRDPNYWTEPERFIDSSIDYKGSNFEFIPFGAGRRICPGSTFGLVNVELAVAFLLYHFDWKLANGMKSEDLDMTEEFGVSATRKDDLYLIPVTSRPFLGTGAESREVRSAGKEG 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1058 196 Gene3D Cytochrome P450 1 172 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1058 196 PRINTS E-class P450 group I signature 109 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1058 196 PRINTS E-class P450 group I signature 37 55 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1058 196 PRINTS E-class P450 group I signature 78 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1058 196 PRINTS E-class P450 group I signature 119 142 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1058 196 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 112 121 IPR017972 GO:0005506|GO:0016705
Ssu2g1058 196 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 1 177 - -
Ssu2g1058 196 SUPERFAMILY Cytochrome P450 1 173 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1058 196 PRINTS P450 superfamily signature 3 16 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1058 196 PRINTS P450 superfamily signature 119 130 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1058 196 PRINTS P450 superfamily signature 38 49 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1058 196 PRINTS P450 superfamily signature 110 119 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1058 196 Pfam Cytochrome P450 1 161 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1058 196 PANTHER CYTOCHROME P450 71B11-RELATED 1 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1058 Ssu-Chr2 49351343 49352334 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1058 1 173 Cytochrome P450 AT3G26330 52.222 1.36e-60 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1058 - - gmx:100797504 326.25