Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1057 ATGGCAGAGGTGGTAAGGGATCCAAGGGTGATGAAGAAAGCACAAGCTGAAGTGAGAGAGGTATTCAACACGAAGGGAAGGGTTGATGAAACATGCatcaatgaaatgaaatatttgaaatcTGTTGTCAAAGAGACTCTAAGGTTACATCCTCCAGCTCCTCTTTTACTTCCAAGAGAATGTGGACAAGCATGTGACATTCATGGGTATCATATACCGGTCAAAAGTAAAGTCATAGTGAATGCTTGGGCAATTGGAAGAGATCCAAACTACTGGACAGAACCAGAGAGGTTTTATCCAGAGAGATTCATTGACAGCTCTATTGACTACAAAGGGAGTAATTTTGAGTACATTCCATTTGGTGGTGGAAGAAGAATATGCCCAGGAAGCACATTTGGGTTGATATATGTTGAGCTGACACTTGCATTGTTGTTGTATCACTTTGATTGGAAGCTTCCAAATGGAATGAAAAGTGAGGACTTGGATATGACTGAGCAATTTGGGTTACTTGTTAGAAGAAAACATGACCTGTGTTTGACTCCTTTGCTACCAAAGGTTGCTAGCTCAAGTGGTTCAGCGCTTGAACTCCTTAACCAAGGTCTGGTGTTCGATTCCTGGCTTGGGCATGGAGTCACAACTGAAGGTATCACTTTATCCCCAAAGGGGCCGACTCAGTGA 678 0.4174 MAEVVRDPRVMKKAQAEVREVFNTKGRVDETCINEMKYLKSVVKETLRLHPPAPLLLPRECGQACDIHGYHIPVKSKVIVNAWAIGRDPNYWTEPERFYPERFIDSSIDYKGSNFEYIPFGGGRRICPGSTFGLIYVELTLALLLYHFDWKLPNGMKSEDLDMTEQFGLLVRRKHDLCLTPLLPKVASSSGSALELLNQGLVFDSWLGHGVTTEGITLSPKGPTQ 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1057 225 Pfam Cytochrome P450 2 171 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1057 225 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 1 183 - -
Ssu2g1057 225 PANTHER CYTOCHROME P450 71B11-RELATED 1 183 - -
Ssu2g1057 225 PRINTS E-class P450 group I signature 127 150 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1057 225 PRINTS E-class P450 group I signature 117 127 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1057 225 PRINTS E-class P450 group I signature 40 58 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1057 225 PRINTS E-class P450 group I signature 81 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1057 225 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 120 129 IPR017972 GO:0005506|GO:0016705
Ssu2g1057 225 PRINTS P450 superfamily signature 41 52 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1057 225 PRINTS P450 superfamily signature 6 19 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1057 225 PRINTS P450 superfamily signature 118 127 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1057 225 SUPERFAMILY Cytochrome P450 1 180 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1057 225 Gene3D Cytochrome P450 1 177 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1057 Ssu-Chr2 49323009 49323686 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1057 1 181 Cytochrome P450 AT3G26300 55.249 3.70e-69 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1057 - - gmx:102665189 323.939