Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1055 ATGGCTGAGATGGTAAGAGATCCAAGAGTGATGAAGAAAGCACAATCTGAAGTgagaaaatttttcaatataaaaggaAGGGTTGATTACACTTGCATTAATGAACTCAAATATTTGAAATCAGTTGTCAAGGAGACCTTAAGATTACACCCTCCAGGACCTCTCTTACTTCCAAGAGAATGTAGACAAGCATGTAAGATTCATGAGTATGACATACCCATCAAAAGCATGGTCATAGTCAATGCTTGGGCAATTGGAAGAGATCCAAACTACTGGATTGACCCAGATAGGTTTTATCCAGAGAGATTCATTGATAGCTCTATTGACTACAAAGGGAGTAATTTTGAGTACATTCCATTTGGTGCTGGAAGAAGAATATGTCCAGGCAGCACATTTGGTTTGATAAATGTTGAGCTGGCACTTGCATTATTGTTGTATCATTTTGATTGGAAGCTCCCCAATGGAATGAAAAATGAGGACTTAGACATAACAGAGGAATTTAGAGTGACTATTAGAAGAAAAGATGACTTGTACTTGATTCCTGTATCTTCTCCTTCTTTGGTTACAATATTGGGTTTTGTATGCCTAGACATGTGTCAACATAATTCTGTGGCACGGGATGCATTATTGAATCTCTTGGACCATattaaaacccaAATAATCACTTCTTATAAGACCATCATCGTCGCTGCCATTGtcgttgccgccaccaccaccaacgccggtagtggtggtggcggcagcaacgatggtggtgacggtggtggtggtggctgtgacagtaatggtggtggtggcagcagcaaCAGGTGTAATGGTGGCAACGGTGacaacaatggtagtggtggcgacTGCGGGGGCagtgacgacagtggtggtggtggcaactgTGGGGGCGGTGACGAcatcagtggtggtggtggtagtggcaataGTGGTGGCGATGTTAGTGATGGTGGTGAAGATGGCGGCGACAACAGTGGTGGCAGTGGCGGTGGTGACGGTAGTGgtaacaatgatggtggtagtgACAACAGTTGTAGAGGCAGAGACAATAGTGGTCTCATAAGAgttgtttaa 1080 0.3222 MAEMVRDPRVMKKAQSEVRKFFNIKGRVDYTCINELKYLKSVVKETLRLHPPGPLLLPRECRQACKIHEYDIPIKSMVIVNAWAIGRDPNYWIDPDRFYPERFIDSSIDYKGSNFEYIPFGAGRRICPGSTFGLINVELALALLLYHFDWKLPNGMKNEDLDITEEFRVTIRRKDDLYLIPVSSPSLVTILGFVCLDMCQHNSVARDALLNLLDHIKTQIITSYKTIIVAAIVVAATTTNAGSGGGGSNDGGDGGGGGCDSNGGGGSSNRCNGGNGDNNGSGGDCGGSDDSGGGGNCGGGDDISGGGGSGNSGGDVSDGGEDGGDNSGGSGGGDGSGNNDGGSDNSCRGRDNSGLIRVV 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1055 359 PANTHER CYTOCHROME P450 71B11-RELATED 1 185 - -
Ssu2g1055 359 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 1 185 - -
Ssu2g1055 359 Gene3D Cytochrome P450 1 177 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1055 359 SUPERFAMILY Cytochrome P450 1 181 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1055 359 MobiDBLite consensus disorder prediction 331 350 - -
Ssu2g1055 359 Pfam Cytochrome P450 2 166 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1055 359 PRINTS E-class P450 group I signature 40 58 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1055 359 PRINTS E-class P450 group I signature 127 150 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1055 359 PRINTS E-class P450 group I signature 81 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1055 359 PRINTS E-class P450 group I signature 117 127 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1055 359 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 120 129 IPR017972 GO:0005506|GO:0016705
Ssu2g1055 359 PRINTS P450 superfamily signature 127 138 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1055 359 PRINTS P450 superfamily signature 6 19 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1055 359 PRINTS P450 superfamily signature 118 127 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1055 359 PRINTS P450 superfamily signature 41 52 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1055 359 MobiDBLite consensus disorder prediction 296 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1055 Ssu-Chr2 49180260 49181746 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1055 1 182 Cytochrome P450 AT3G26230 55.435 1.95e-65 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1055 - - gmx:100818520 320.472