Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1052 ATGTATTGTTGGATACCATCTGCTTATCATTTTGGATTTGGCTCCTACGAGGACATATTTGGTGCTGGAGGTGAGACATCATCAACTACCATAAATTGGGCAATGGCAGAGATGATAAGGGATCCAAGAGTAATGAAGAAAGCACAAGTTGAAGTGAGAGAGGTATACATGACGAAAGGAATGGTTGATGAAATTTCCATTGATGAactcaaatatttgaaattagttgTTAAAGAAACCCTAAGGCTACACCCTCCATCTCCTCTTTTAATTCCAAGAGAATGTGGACAAGCATGTGAGATTGATGGGTATCATATACCAGTCAAAAGTAGGGTCTTGGTGAATGCTTGGGCAATTGGAAGAGATCCAAACTACTGGACTGAGCCAGAGAGATTTTATCCAGAGAGATTCATTGATAGCTCTATTAACTACAAAGGGAGCAATTTTGAGTACATTCCATTTGGTGCCGGAAGAAGAATATGCCCAGGCAGCACATTTGGTTTGATAAATGTTGAGCTGGCActtgcatttttgttgtttcACTTTGATTGGATGCTTCCGAATGGAATGAAAAGTGAGGATTTGGACATGACTGAGCAATTTGGAGTGACTGTTAGAAGAAAAGATGACCTATACTTGATACCTATCACTTCTCATCCTATCCCGGTAAGATAA 675 0.3793 MYCWIPSAYHFGFGSYEDIFGAGGETSSTTINWAMAEMIRDPRVMKKAQVEVREVYMTKGMVDEISIDELKYLKLVVKETLRLHPPSPLLIPRECGQACEIDGYHIPVKSRVLVNAWAIGRDPNYWTEPERFYPERFIDSSINYKGSNFEYIPFGAGRRICPGSTFGLINVELALAFLLFHFDWMLPNGMKSEDLDMTEQFGVTVRRKDDLYLIPITSHPIPVR 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1052 224 PANTHER CYTOCHROME P450 FAMILY PROTEIN 17 218 - -
Ssu2g1052 224 Gene3D Cytochrome P450 15 211 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1052 224 PRINTS E-class P450 group I signature 151 161 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1052 224 PRINTS E-class P450 group I signature 74 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1052 224 PRINTS E-class P450 group I signature 161 184 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1052 224 PRINTS E-class P450 group I signature 11 28 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1052 224 PRINTS E-class P450 group I signature 115 139 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1052 224 PRINTS E-class P450 group I signature 31 57 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1052 224 PANTHER CYTOCHROME P450 71B11-RELATED 17 218 - -
Ssu2g1052 224 Pfam Cytochrome P450 18 204 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1052 224 SUPERFAMILY Cytochrome P450 18 215 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1052 224 PRINTS P450 superfamily signature 75 86 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1052 224 PRINTS P450 superfamily signature 152 161 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1052 224 PRINTS P450 superfamily signature 22 39 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1052 224 PRINTS P450 superfamily signature 161 172 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1052 224 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 154 163 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1052 Ssu-Chr2 49123693 49124620 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1052 18 215 Cytochrome P450 AT3G26300 54.545 3.64e-75 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1052 - - gmx:102665189 370.163