Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1031 ATGGCTATATTTGTGTATATTGGAGTATTTGTATCCATTCTCTCCTTCATATTCTTCCAGATCAGCCGTAGACACAATAGAGATGTACCTCTTACAAATTGGCCAATCATTGGTATGCTACCAGCGGTTCTACAAAATCTGTCCAATATCCATGATTATGCAACCGTTGTTTTGAAGCATTATGGAGGCACTCTAAGGTTTGAAGGACCCTGGTTCACAAACACCAGCTTTATCCTCACCAGCGATCCCATGAACGTGCACCACATCACAAGCAAGAATTTTGTTAACTATGGGAAAGGGCCCAATTTCAATGAGATTTTTGAAGTTTTAGGAGGTGGGATTTTTAATGCTGATTTCCATGCATGGGAACAAGAGAGGACAGTACTTCATTCATTGCTTAAAAGGAAAAGCTTTAAGATCTTCCTTCAGCAAACCACTCAGAAGAAGCTGGAGAATTGCCTAATACCATTTCTTGATCATGCATCCAAAGCTGGAGCAGAGGTGGACTTACAAGATGTCTTTCAGAGGTTCACCTTTGACACTGTCTGCTCTAGTGTTTTTGGATATGATCCTAATTGCCTTCCATACAAGTTCACTAAGCTCTCACACTTTGCTTATGAGAAAGCTTTAATTGTGATGGAGGATGTAGCATTCTACAGGCACCTCACACCAAGATGTTTGTGGAAGCTGCAGGAATGCCTACAAATTGGTCAAGAAAAGAAGTTCAAGGAGGCCaaagaaaattttgacaaattctTGCATGAACGTATTGCATCTAAACTTGAAGAGCAAAGTAGATGCAATAGCACCGAAAAAGTGGATGACACTCATTCTGACCTGCTAAGAGGGCTAATGGAGGAAGGAGCTGAAAAGGGTCAAAGAATGGATGACAAGTATCTTAGAGACACTGCATTTTCCTTGGTTGCTGCAGGAAGCGGCACTGTTAGTGCGAGTCTCAGTTGGTTCTTTTGGCTCGTTTCAACTCATCCAGTTGTGGAAGCTAAAATTCTTCAAGAGATCAAAGATAACTGTCTAAACCAAGATGGAAATTGGATTGCTTCAAGTGTGGAAGAGTTTGGTAAGCTTGTTTACCTCCATGGAGCTATATGTGAAGCCTTGAGGCTTTTTCCTTCTATTCCTTTTGACCACAAGTGTGCAATCAAATCTGATATGCTCCCTAGTGGACACCATGTTAGTCCAAATACCATGATAATATACTCTTTGTATGCAATGGGAAGGATGGAACAAATATGGGGAGATGACTACTTGGAATTTAAGCCAGAGAGATGGATATCAGAGAGAGGAGGCATCATACACGTTCCATCTTACAAGTTCATAGCTTTCAATGCAGGGCCCAGAAGTTGTTTGGGTAAAGACATTACCCTTATTGAAATGAAGATGGCTGCAGTTGCTTTACTATGGAGGTTTCACATGCAGGTGGTGGAAGGTCATCCTATAACCCCAAGACTTTCTGTTATACTTAGCATGGAACATGGCTTGAAGGTTAAAGTTACTGAAAGATGCACTTGA 1530 0.4078 MAIFVYIGVFVSILSFIFFQISRRHNRDVPLTNWPIIGMLPAVLQNLSNIHDYATVVLKHYGGTLRFEGPWFTNTSFILTSDPMNVHHITSKNFVNYGKGPNFNEIFEVLGGGIFNADFHAWEQERTVLHSLLKRKSFKIFLQQTTQKKLENCLIPFLDHASKAGAEVDLQDVFQRFTFDTVCSSVFGYDPNCLPYKFTKLSHFAYEKALIVMEDVAFYRHLTPRCLWKLQECLQIGQEKKFKEAKENFDKFLHERIASKLEEQSRCNSTEKVDDTHSDLLRGLMEEGAEKGQRMDDKYLRDTAFSLVAAGSGTVSASLSWFFWLVSTHPVVEAKILQEIKDNCLNQDGNWIASSVEEFGKLVYLHGAICEALRLFPSIPFDHKCAIKSDMLPSGHHVSPNTMIIYSLYAMGRMEQIWGDDYLEFKPERWISERGGIIHVPSYKFIAFNAGPRSCLGKDITLIEMKMAAVALLWRFHMQVVEGHPITPRLSVILSMEHGLKVKVTERCT 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1031 509 SUPERFAMILY Cytochrome P450 29 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1031 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506|GO:0016705
Ssu2g1031 509 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1031 509 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1031 509 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1031 509 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1031 509 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1031 509 Gene3D Cytochrome P450 18 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1031 509 PANTHER CYTOCHROME P450 FAMILY PROTEIN 18 504 - -
Ssu2g1031 509 Pfam Cytochrome P450 31 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1031 509 PANTHER CYTOCHROME P450 18 504 - -
Ssu2g1031 509 PRINTS P450 superfamily signature 455 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1031 509 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1031 509 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1031 509 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1031 Ssu-Chr2 48475248 48476777 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1031 5 508 Cytochrome P450 AT4G39490 44.444 1.09e-157 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1031 - - gmx:100791312 892.878