Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1015 ATGGACGCATTCACTTGCATactcctctttcttttcaccATCACCTTTCTTAAAGCCCTCACTTCACTACTAATTCCAAACAGCAGCAAGGCAAATCACAAACTCCCACCACGACCTGTGGGCCTTCCCATAATTGGAAACCTCCACCAACTGGGTGCCAAGCCCCACCAAACCTTGGCCACTCTAGCCAAGACTTATGGCCCAATAATGAGCCTCAAGCTGGGCCAAATCACCACCATAGTGATGTCCTCAGCTGAAATGGCCAAAGGAGTGCTCCAAATCCATGACCAGTTCATGTCAAACAGAAAGATCCCTGATGCAATGAAAGGTGCCAACCATGACCAATACAGCTTGCCCTTCATCCCAGTTTCACATCACTGGCGAGACTTGAGAAAAATATGCAACGGCCTGTTGTTCTCCAACAAGAACTTAGATGCCAGCGAGGGACTTAGGCGCAAGAAGGTTCAGGAGCTTTTCAGTGACATCTACCAAAGCAGCTTGAGGGGTGAAGCTGTGGATATCGGAAGGTTGGTTTTCAAGACCACCATAAACTTGTTGTCAAACACGGTTTACTCGGAGGATTTGATTCACTCTGACGATAAAGCAGGGGAGTTCAAGGAGTTGGTGGCAAACATCATGAAAGAGGTTGGAAGGCCAAATTTGGCTGATTGCTTTCCGGTGTTGAAGGTGATTGACCCTCATGGCATCAGAAGGCGCACCGGGAATGACTTTTGGAAGTTGTTGACCATATTCAAGGGGTTGGTTGACAAAAGGTTGAAGCTAAGAAAAAGTGATGGTTATTGCACCAAAAATGACATGCTAGATGCCATTCTCAACAATGCTGAAGAGAACAGTCAGGAGATGTACAAAGATAAGATTGAACGTTTGTCATTGGACTTGTTTGTGGCAGGGACAGATACAGTAACTTCTACAGTAGAATGGGCAATGGCTGAGTTACTTCACAACCCAAATATTATGTCTAAGGCAAAGGCAGAGCTAGAGAAGACTATTGGCAAAGGTAACCTTGTGGAAGAATCAGACATTGCTAGACTCCCTTACTTGCAAGCAATAGTGAAAGAGACTTTCAGGTTGCACCCAGCAGCTCCACTTTTACTGCCAAGAAAAGCCGAAGTGGAGCTGGAGATGCATGGCTACACAGTCCCAAAGGGTGCACAAGTGCTAGTTAATGTGTGGGCCATTGGTAGGGACCCAAATTTGTGGGACAATCCGAGTTTGTTTTGGCCAGAGAGGTTCTTGGGGTCAGAAATTGACTTTAGAGGACACAGTTTTGAGCTGACCCCATTTGGTGCTGGGAGGAGAATATGTCCTGGCTTGCCATTGGCCATAAGATTGTTGTTCTTGATGTTGGGTTTGCTTATCAATTCCCTTGATTGGGACCTTGAGGGTGGGATTAAATCAGAGGATATGAATATGGATGAAAAATTTGGACTAACCTTACGGAAGGCTCAACCTGTGCTAGCTGTTCCAATCAAAGCAAGCAATTAA 1506 0.4515 MDAFTCILLFLFTITFLKALTSLLIPNSSKANHKLPPRPVGLPIIGNLHQLGAKPHQTLATLAKTYGPIMSLKLGQITTIVMSSAEMAKGVLQIHDQFMSNRKIPDAMKGANHDQYSLPFIPVSHHWRDLRKICNGLLFSNKNLDASEGLRRKKVQELFSDIYQSSLRGEAVDIGRLVFKTTINLLSNTVYSEDLIHSDDKAGEFKELVANIMKEVGRPNLADCFPVLKVIDPHGIRRRTGNDFWKLLTIFKGLVDKRLKLRKSDGYCTKNDMLDAILNNAEENSQEMYKDKIERLSLDLFVAGTDTVTSTVEWAMAELLHNPNIMSKAKAELEKTIGKGNLVEESDIARLPYLQAIVKETFRLHPAAPLLLPRKAEVELEMHGYTVPKGAQVLVNVWAIGRDPNLWDNPSLFWPERFLGSEIDFRGHSFELTPFGAGRRICPGLPLAIRLLFLMLGLLINSLDWDLEGGIKSEDMNMDEKFGLTLRKAQPVLAVPIKASN 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1015 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Ssu2g1015 501 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 500 - -
Ssu2g1015 501 Gene3D Cytochrome P450 24 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1015 501 SUPERFAMILY Cytochrome P450 36 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1015 501 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1015 501 PRINTS P450 superfamily signature 442 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1015 501 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1015 501 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1015 501 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1015 501 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1015 501 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1015 501 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1015 501 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1015 501 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1015 501 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1015 501 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1015 501 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 500 - -
Ssu2g1015 501 Pfam Cytochrome P450 36 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1015 Ssu-Chr2 47955550 47957759 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1015 7 498 Cytochrome P450 AT2G45550 48.290 7.32e-168 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1015 - - lja:Lj2g3v0039250.1 675.626