Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1006 ATGCCTCCAATCTCATTCTTCTATAGCTATTCCACCTCTTCTCTTTTTCATACACCACTTTTCATTGTGTCCAAAATCACTGCCTCCACCACACAAGCTATTATTTGTTTCGACTCTTTTCAGTTCCTTCTCATCATCACATCCCTGCTTTTCACTTCTttgtttcttctccttcctTTCCTCCAATGGTGGCACCACCACAAGCACAAAAAATTGCCCCCTGGTTCCATGGGTTGGCCCTACCTAGGAGAGACCCTCAAGCTCTATACTGAAAACCCAAATTCCTTCTTCTCTAACCGGCAAAAACGGTATGGAGATATATTCAAGACAAACATATTGGGTTGTCCTTGTGTGATGATATCAAGTCCTGAGGTAGCTAGAACTGTGCTTGTGACTCAAGCACATCTTTTCAAGCCAACATACCCTCCAAGCAAAGAGAAGTTGATAGGACCAGAGGCTGTGTTCTTTCAACAAGGTGCCTATCACTCCATGCTCAAGAAGCTAGTTCAGGCCTCATTTTTACCCTCCACGATTAAGCACACAGTCTCTGAGGTCGAGCAAATTGTCATCAAAATGGTGCCAACTTGGGCCAACAGAACCATCAACACCTTGCAAGAGATGAAGAAGTATGCTTTTGAAGTAGCTGCAATTTCGGCCTTTGGTGAAATAAAGGAGCTTGAAATGGAGGAAATCAGAGAGCTGTATCGTTGCTTGGAGAAGGGCTACAACTCTTATCCATTACATATTCCTGGAACTGCCTATTGGCACGCCATGAAGGCAAGGAATCATCTGAATGAGAGCATAAGGAGGATAatagagagaagaaaggaaAGTTCACAGTATGGTGGAGGGCTACTGGGAGTTTTATTGCAAGCGAGAGGTCACAAGATGTACCAGCTCACTGATTCTCAAGTTGCTGATAATCTCATTGGTGTGATCTTTGCTGCACATGACACCACAGCAAGTGCTCTAACATGGGTCCTCAAGTATTTGCACGACAACCCCAATCTATTGGAAGCTGTGACGaaagaacaagaaggaataaaaaacaaactagCTTTGGAAAATCGTGGACTTTCGTGGGATGATACCAGGCAGATGCCGTTCACTAGCCGGGTGATCCAAGAAACACTGAGAAGCGCAAGCATTTTGTCATTCACATTCAGAGAAGCAGTAACAGATGTTGAGTTGGAAGGTTACACTATTCCAAAAGGTTGGAAGGTCCTTCCACTCTTCAGAAGCATTCATCATTCTGCTGACTTCTTCCCTCAGCCAGAGAAGTTTGACCCTTCAAGATTCGAGGTGCCACCGAGACCAAACACATACATGCCTTTTGGAAATGGAGTCCACTCTTGTCCAGGCAGTGAGCTGGCTAAGCTTGAGGTTCTTGTCCTCCTTCATCACCTCACCGTTTCTTACAGGTGGCAAGTTGTGGGAAATGAAGATGGAATTCAATATGGTCCTTTTCCTGTGCCTAAACATGGATTACCAGTGAAGATAACCCCGAGGAACAAGATATTTACGTGA 1527 0.4296 MPPISFFYSYSTSSLFHTPLFIVSKITASTTQAIICFDSFQFLLIITSLLFTSLFLLLPFLQWWHHHKHKKLPPGSMGWPYLGETLKLYTENPNSFFSNRQKRYGDIFKTNILGCPCVMISSPEVARTVLVTQAHLFKPTYPPSKEKLIGPEAVFFQQGAYHSMLKKLVQASFLPSTIKHTVSEVEQIVIKMVPTWANRTINTLQEMKKYAFEVAAISAFGEIKELEMEEIRELYRCLEKGYNSYPLHIPGTAYWHAMKARNHLNESIRRIIERRKESSQYGGGLLGVLLQARGHKMYQLTDSQVADNLIGVIFAAHDTTASALTWVLKYLHDNPNLLEAVTKEQEGIKNKLALENRGLSWDDTRQMPFTSRVIQETLRSASILSFTFREAVTDVELEGYTIPKGWKVLPLFRSIHHSADFFPQPEKFDPSRFEVPPRPNTYMPFGNGVHSCPGSELAKLEVLVLLHHLTVSYRWQVVGNEDGIQYGPFPVPKHGLPVKITPRNKIFT 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1006 508 Pfam Cytochrome P450 73 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1006 508 SUPERFAMILY Cytochrome P450 63 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1006 508 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1006 508 PRINTS E-class P450 group I signature 411 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1006 508 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1006 508 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1006 508 PRINTS E-class P450 group I signature 101 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1006 508 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1006 508 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1006 508 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1006 508 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1006 508 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1006 508 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1006 508 Gene3D Cytochrome P450 64 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1006 508 PANTHER CYTOCHROME P450 26 47 501 - -
Ssu2g1006 508 PANTHER ABSCISIC ACID 8'-HYDROXYLASE 2 47 501 - -
Ssu2g1006 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1006 Ssu-Chr2 47617725 47626255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1006 44 498 Cytochrome P450 AT3G19270 55.702 0.0 542
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1006 K09843 - gmx:100782541 829.706