Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0994 atgacGTTGTTGAAGTTCCATGAACTGTGGAAGCCAGTTTTGGTGAtgattatagttaatttagctCTGGCTTTTGTCAATATATTTCTGAAGAAGGTTCTTAATGAAGGAGTGGACTACTTGACCATTCTAACATATAGACAGGCAATTTCAGCCGTTTTCTTAGCACCTATTGCTTGCTTCTATGAAAGgaAAAGGAAGCTGGAGGGTCACATAATATGCTTGCTTTTCCTAAGTGCTCTTGTGGGGGTAACACTCACTCAATACCTCTATCTTATTGGACTAGAATATACATCTGCCACGTTCTCATGTGCATTCCTAAATATGGTGCCTGTATTCACGTTTATTATGGCGCTGCCACTGGGGATGGAGAAGGTGAACATGAAAAGCCTGAGTGCTAAGGCCAAGGTCTTGGGAACTTTTGTGTGTATTGGTGGAGCTTTGTTGTTGATCCTTTATAAAGGAATGCCCTTAATAAACCGACAACCAGAGCACATAGCAGACAAAGGCATAACCACCACATCAGCCTCCAAGTTAAAGAAATGGATTATAGGTTCATTGCTTCTAACTGCAGGATGCCTCTTGTGGTCTTCATGGTTTCTTATACAAGCAAGGATTAGCAAAAAGTATCCATGTCAATACTCTAGCACAGccattttgtccttttttgCTGCCATTCAATCAGCAATGTTAACTTTGGTCATCGATAGAAATAATGCCAAATGGATTCTCAAAGGAAAGTTAGAGATAATGACTGTTATATATGCTGGGCTGGTAGGATCAGGCTTGTGCTACGTGGCAATGTCATGGTGTGTTAAACAAAGGGGTCCAGTTTTTACTTCAGCATTTACCCCTCTTCTACAGATGTTTGTGGCTGTGCTTGATTTCTCTATATTACAAGAGGAAATTTATCTAGGAAGTGTTGCAGGATCAGTCCTGGTTATTTCTGGCACATATATTCTACTTTGGGGTAAAAGTAAAGAGGAAGAACAATGTGTCGTGAAGGATACTCAAGAAAATCAAGAAGGTGaagaatgtataaataatttcgAGGCTAGTCCAAATGTACCTTCTAAGCTAAGGCCTAAAGGGGAACATTAA 1101 0.3833 MTLLKFHELWKPVLVMIIVNLALAFVNIFLKKVLNEGVDYLTILTYRQAISAVFLAPIACFYERKRKLEGHIICLLFLSALVGVTLTQYLYLIGLEYTSATFSCAFLNMVPVFTFIMALPLGMEKVNMKSLSAKAKVLGTFVCIGGALLLILYKGMPLINRQPEHIADKGITTTSASKLKKWIIGSLLLTAGCLLWSSWFLIQARISKKYPCQYSSTAILSFFAAIQSAMLTLVIDRNNAKWILKGKLEIMTVIYAGLVGSGLCYVAMSWCVKQRGPVFTSAFTPLLQMFVAVLDFSILQEEIYLGSVAGSVLVISGTYILLWGKSKEEEQCVVKDTQENQEGEECINNFEASPNVPSKLRPKGEH 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0994 366 PANTHER WAT1-RELATED PROTEIN 10 348 - -
Ssu2g0994 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 154 - -
Ssu2g0994 366 Pfam EamA-like transporter family 11 151 IPR000620 GO:0016020|GO:0016021
Ssu2g0994 366 Pfam EamA-like transporter family 184 322 IPR000620 GO:0016020|GO:0016021
Ssu2g0994 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 251 327 - -
Ssu2g0994 366 MobiDBLite consensus disorder prediction 345 366 - -
Ssu2g0994 366 PANTHER WAT1-RELATED PROTEIN 10 348 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0994 Ssu-Chr2 47458261 47461994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0994 1 330 Nodulin-like Gene Family AT1G11460 41.791 3.74e-84 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0994 - - gmx:100794199 669.077