Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0988 ATGACAGCAATGGAGAATACTCCTCATCACATGCTTCAAATGGTTTCCATCTTGGTTCTAATTCTATGTATTTCCTCATTGGCCTCATCAGCATCTCTGAAGGTGGGTTTCTATAGTTCCACATGTCCATCTGCCGAGGCAATAGTAAGAAGCACAGTAAACAAAGCAATTTCTGACAACCCAGGCATAGCTGCTGGCCTCATTAGAATGCATTTCCATGATTGCTTTGTGAGGGGTTGTGATGGTTCTGTGTTACTAGCATCTACATCAGGTAACCCAGTAGCTGAGAGAGACAATTCCATCAACAATCCAAGCTTACGCGGTTTCGAGGTGATTGAGGATGTCAAGACCCAAATAGAAGCTGCATGTCCTCAAACAGTGTCGTGTGCAGACATTTTGGCATTTGCAGCACGAGACAGTGCTCTCAAAGTTGGTGGCATAAACTACGACGTACCATCAGGACGCAGAGACGGTCTTGTCTCGATCGGTGATGAAGTGCCACAAAATCTTCCTGGACCAACCTTGAGTGCTGATGAACTTGTTACTAATTTTGCACGAAAGGGGTTGTCGGGAGATGAAATGGTGACACTTTCAGGAGCACATTCAATAGGTGTGTCACATTGCTCCTCCTTCTCGAAGCGCTTATACACTTTCAGTGACACATGCACACAAGACCCCTCAATGGACCCTTCATATGCTGCAACGTTGAAAACCAAGTGTCCTGCACCACCCGCCACCACAGACCCAACAGTTCCTCTTGAGCCTTCCACTTCTATTCGTTTGGACAACAAATACTATGAGGGATTGATCAACCATCGTGGCTTGTTGACATCAGATCAGACCTTGTTTACCAGCCAGTCCACAAAGGAAATGGTTCAAAGCAATGCATACAATGGTGCAAGTTGGGCTGAGAAATTTGCCCAGGCAATGGTGCGCATGGGTTCCATAGAAGTGCTTACTGGCTCCGATGGGGAGATCAGGACGCATTGCAGctttgtcaattaa 1005 0.4597 MTAMENTPHHMLQMVSILVLILCISSLASSASLKVGFYSSTCPSAEAIVRSTVNKAISDNPGIAAGLIRMHFHDCFVRGCDGSVLLASTSGNPVAERDNSINNPSLRGFEVIEDVKTQIEAACPQTVSCADILAFAARDSALKVGGINYDVPSGRRDGLVSIGDEVPQNLPGPTLSADELVTNFARKGLSGDEMVTLSGAHSIGVSHCSSFSKRLYTFSDTCTQDPSMDPSYAATLKTKCPAPPATTDPTVPLEPSTSIRLDNKYYEGLINHRGLLTSDQTLFTSQSTKEMVQSNAYNGASWAEKFAQAMVRMGSIEVLTGSDGEIRTHCSFVN 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0988 334 PANTHER PEROXIDASE 22 332 - -
Ssu2g0988 334 Gene3D - 36 334 - -
Ssu2g0988 334 ProSiteProfiles Plant heme peroxidase family profile. 32 334 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g0988 334 PRINTS Plant peroxidase signature 66 86 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0988 334 PRINTS Plant peroxidase signature 192 204 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0988 334 PRINTS Plant peroxidase signature 107 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0988 334 PRINTS Plant peroxidase signature 145 160 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0988 334 PRINTS Plant peroxidase signature 252 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0988 334 PRINTS Plant peroxidase signature 42 61 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0988 334 PRINTS Plant peroxidase signature 126 136 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0988 334 PRINTS Plant peroxidase signature 308 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0988 334 PRINTS Plant peroxidase signature 268 285 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0988 334 ProSitePatterns Peroxidases proximal heme-ligand signature. 193 203 IPR019793 -
Ssu2g0988 334 PRINTS Haem peroxidase superfamily signature 193 208 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g0988 334 PRINTS Haem peroxidase superfamily signature 254 269 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g0988 334 PRINTS Haem peroxidase superfamily signature 127 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g0988 334 PRINTS Haem peroxidase superfamily signature 64 78 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g0988 334 PRINTS Haem peroxidase superfamily signature 145 157 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g0988 334 ProSitePatterns Peroxidases active site signature. 64 75 IPR019794 GO:0004601
Ssu2g0988 334 CDD secretory_peroxidase 34 333 IPR033905 GO:0004601|GO:0042744
Ssu2g0988 334 SUPERFAMILY Heme-dependent peroxidases 33 334 IPR010255 GO:0004601|GO:0006979|GO:0020037
Ssu2g0988 334 Pfam Peroxidase 49 296 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g0988 334 Gene3D Peroxidase, domain 2 171 313 - -
Ssu2g0988 334 PANTHER PEROXIDASE 25-RELATED 22 332 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0988 Ssu-Chr2 47345623 47346737 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0988 18 334 Peroxidase AT4G11290 46.584 2.90e-95 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0988 K00430 - gmx:100786791 523.472