Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0987 ATGGACCCTTCATATGCTGCAACGTTGAAAACCAAGTGTCCTGCACCACCCGCCACCACAGACCCAACAGTTCCTCTTGAGCCTTCCACTTCTATTCGTTTGGACAACAAATACTATGAGGGATTGATCAACCATCGTGGCTTGTTGACATCAGATCAGACCTTGTTTACCAGCCAGTCCACAAAGGAAATGGTTCAAAGCAATGCATACAATGGTGCAAGTTGGGCTGAGAAATTTGCCCAGGCAATGGTGCGCATGGGTTCCATAGAAGTGCTTACTGGCTCCGATGGGGAGATCAGGACGCATTGCAGctttgtcaattaa 324 0.4691 MDPSYAATLKTKCPAPPATTDPTVPLEPSTSIRLDNKYYEGLINHRGLLTSDQTLFTSQSTKEMVQSNAYNGASWAEKFAQAMVRMGSIEVLTGSDGEIRTHCSFVN 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0987 107 Gene3D - 87 107 - -
Ssu2g0987 107 SUPERFAMILY Heme-dependent peroxidases 1 107 IPR010255 GO:0004601|GO:0006979|GO:0020037
Ssu2g0987 107 Pfam Peroxidase 1 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g0987 107 Gene3D Peroxidase, domain 2 1 86 - -
Ssu2g0987 107 PRINTS Plant peroxidase signature 25 40 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0987 107 PRINTS Plant peroxidase signature 41 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0987 107 PRINTS Plant peroxidase signature 81 94 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0987 107 PANTHER PEROXIDASE 25-RELATED 1 105 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0987 107 PANTHER PEROXIDASE 1 105 - -
Ssu2g0987 107 MobiDBLite consensus disorder prediction 1 29 - -
Ssu2g0987 107 ProSiteProfiles Plant heme peroxidase family profile. 1 107 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0987 Ssu-Chr2 47326634 47326957 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0987 1 107 Peroxidase AT3G50990 44.444 3.66e-23 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0987 K00430 - gmx:100786791 167.162