Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0986 ATGGAGAATACTCCTCATCACATGCTTCTAATGGTTTCCATCTTGGTTCTAATTCTATGTATTTCGTCATTGGCTTCATCAGCATCTCTGAAGGTGGGTTTCTATAGTTCCACATGTCCATCTGCCGAGGCAATAGTAAGAAGCACAGTAAACAAAGCAATTTCTGACAACCCAGGCATAGCTGCTGGCCTCATTAGAATGCATTTCCATGATTGCTTTGTGAGGGGTTGTGATGGTTCTGTGTTACTAGCATCTACATCGGGTAACCCAGTAGCTGAGAGAGACAATTCCATCAACAATCCAAGCTTACGCGGTTTCGAGGTGATTGAGGATGTCAAGACCCAAATAGAAGCTGCATGTCCTCAAACCGTGTCGTGTGCAGACATTTTGGCATTTGCAGCACGAGACAGTGCTCTCAAAGTTGGTGGCATAAACTACGACGTACCATCAGGACGCAGAGACGGTCTTGTCTCTATCGGTGATGAAGTCCCACAAAATCTGCCTCGACCAACCTTGAGCGGTGATGAACTTGTTACTAATTTTGCACGAAAGGGGTTGTCAGTGGATGAAATGGTGACACTTTCAGGAGCACATTCAATAGGTGTGTCACATTGCTCCTCCTTCTCAAAGCGCTTATACTCTTTCAGTGACACATCCACACAAGACTCCTCAATGGACCCGTCATATGCTGCAACGTTGAAAACCAAGTGTCCTGCACCACCCGCCACCACAGACCCAACAGTGGCTCTTGAGCCTTCCACTTCTATTCGTTTGGACAACAAATACTATGAGGGATTGATCAACCATCGTGGCTTGTTGACATCAGATCAGACCTTGTTCAGCAGCCAGTCCACAAAGGAAATGGTTCAAAGCAATGCGTACAATGGTGCAAGTTGGGCTGAGAAGTTTGCCCATGCAATGGTGCGCATGGGTTCCATAGAACATGACAGCAATGGAGAATACTCCTCATCACATGCTTCAATGGTTTCCATCTTGGTTCTAATTCTATGTATTTCGTCATTGGCCTCATCAGCATCTCTGAAGGTGGGTTTCTATAGTTCCACATGTCCATCTGCCGAGGCAATAGTAAGAAGCACAGTAAACAAAGCAATTTCTGACAACCCAGGCATAGCTGCTGGCCTCATTAGAATGCATTTCCATGATTGCTTTGTGAGGGGTTGTGATGGTTCTGTGTTACTAGCATCTACATCAGGTAACCCAGTAGCTGAGAGAGACAATTCCATCAACAATCCAAGCTTACGCGGTTTCGAGGTGATTGAGGATGTCAAGACCCAAATAGAAGCTGCATGTCCTCAAACAGTGTCGTGTGCAGACATTTTGGCATTTGCAGCACGAGACAGTGCTCTCAAAGTTGGTGGCATAAACTACGACGTACCATCAGGACGCAGAGACGGTCTTGTCTCGATCGGTGATGAAGTGCCACAAAATCTTCCTGGACCAACCTTGAGTGCTGATGAACTTGTTACTAATTTTGCACGAAAGGGGTTGTCGGTAGATGAAATGGTGACACTTTCAGGAGCACATTCATAG 1551 0.4591 MENTPHHMLLMVSILVLILCISSLASSASLKVGFYSSTCPSAEAIVRSTVNKAISDNPGIAAGLIRMHFHDCFVRGCDGSVLLASTSGNPVAERDNSINNPSLRGFEVIEDVKTQIEAACPQTVSCADILAFAARDSALKVGGINYDVPSGRRDGLVSIGDEVPQNLPRPTLSGDELVTNFARKGLSVDEMVTLSGAHSIGVSHCSSFSKRLYSFSDTSTQDSSMDPSYAATLKTKCPAPPATTDPTVALEPSTSIRLDNKYYEGLINHRGLLTSDQTLFSSQSTKEMVQSNAYNGASWAEKFAHAMVRMGSIEHDSNGEYSSSHASMVSILVLILCISSLASSASLKVGFYSSTCPSAEAIVRSTVNKAISDNPGIAAGLIRMHFHDCFVRGCDGSVLLASTSGNPVAERDNSINNPSLRGFEVIEDVKTQIEAACPQTVSCADILAFAARDSALKVGGINYDVPSGRRDGLVSIGDEVPQNLPGPTLSADELVTNFARKGLSVDEMVTLSGAHS 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0986 516 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
Ssu2g0986 516 ProSiteProfiles Plant heme peroxidase family profile. 29 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g0986 516 PANTHER PEROXIDASE 25-RELATED 337 516 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0986 516 PANTHER PEROXIDASE 25-RELATED 19 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0986 516 Gene3D Peroxidase, domain 2 485 516 - -
Ssu2g0986 516 Gene3D Peroxidase, domain 2 168 310 - -
Ssu2g0986 516 CDD secretory_peroxidase 31 320 IPR033905 GO:0004601|GO:0042744
Ssu2g0986 516 Gene3D - 350 484 - -
Ssu2g0986 516 SUPERFAMILY Heme-dependent peroxidases 30 318 IPR010255 GO:0004601|GO:0006979|GO:0020037
Ssu2g0986 516 ProSitePatterns Peroxidases active site signature. 378 389 IPR019794 GO:0004601
Ssu2g0986 516 ProSiteProfiles Plant heme peroxidase family profile. 346 516 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g0986 516 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
Ssu2g0986 516 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g0986 516 PRINTS Haem peroxidase superfamily signature 251 266 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g0986 516 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g0986 516 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g0986 516 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g0986 516 PANTHER PEROXIDASE 337 516 - -
Ssu2g0986 516 PANTHER PEROXIDASE 19 320 - -
Ssu2g0986 516 PRINTS Plant peroxidase signature 142 157 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0986 516 PRINTS Plant peroxidase signature 249 264 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0986 516 PRINTS Plant peroxidase signature 265 282 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0986 516 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0986 516 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0986 516 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0986 516 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0986 516 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0986 516 PRINTS Plant peroxidase signature 305 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0986 516 SUPERFAMILY Heme-dependent peroxidases 347 516 IPR010255 GO:0004601|GO:0006979|GO:0020037
Ssu2g0986 516 Pfam Peroxidase 46 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g0986 516 Pfam Peroxidase 363 516 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g0986 516 Gene3D - 33 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0986 Ssu-Chr2 47319387 47326561 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0986 332 516 Peroxidase AT4G11290 50.267 1.95e-56 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0986 K00430 - gmx:100786791 483.796