Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0985 ATGGAGAATACTCCTCATCACATGCTTCAAATGGTTTCCATCTTGGTTCTAATTCTATATATTTCGTCATTGGCCTCATCGGCATCTCTGAAGGTGGGTTTCTACAGTTCCGCATGTCCATCCGCCGAGGCAATAGTGAGAAGCACAGTAAACAAAGCAATTTCCGACAACCCAGGCATAGCTGCTGGTCTCATTAGAATGCATTTCCATGATTGCTTTGTCAGGGGTTGTGATGGTTCAGTGTTACTAGCATCTATATCGGGTAACCCAGTAGCTGAGAGAGACAATTCCATCAACAATCCAAGCTTACGAGGATTCGAGGTGATTGAGGAGGCCAAGACCCAAATAGAAGCTGCATGTCCTCAAACAGTGTCGTGTGCAGACATTTTGGCATTCGCAGCACGAGACAGTGCTCTCAAACTTGGTGGCATAAACTACGACGTACCATCAGGACGCAGAGACGGTCTTGTCTCTATCGGTGATGAAGTGCCACAAAATCTTCCTGGACCAACCTTGAGTGCTGATGAACTTGTTACTAATTTTGCACGAAAGGGGTTGTCTGTAGATGAAATGGTGACACTTGCAGGAGCACATTCAATAGGTGTGTCACATTGCTCCTCCTTCTCAAATCGCTTATACTCTTTCAGTGACACATCCACACAAGACCCCTCAATGGACTCTTCATATGCTGCAACGTTGAAAACCAAGTGTCCTGCACCACCCGCCACCTACAGACCCAACAATCAGACGCTGTTCAGCAGTCAGTCCACAAAGGAAATTGTTCTAAATAATGCATACTATGGTGCAAGTTGGGCTGAGAAGTTTGCCCAGGCAATGGTGCGCATGGGTTCCATAGAAGTGCTTACTGGCTCCGATGGTGAGATTAGGAAGCACTGCAgctttgttaattaa 912 0.4583 MENTPHHMLQMVSILVLILYISSLASSASLKVGFYSSACPSAEAIVRSTVNKAISDNPGIAAGLIRMHFHDCFVRGCDGSVLLASISGNPVAERDNSINNPSLRGFEVIEEAKTQIEAACPQTVSCADILAFAARDSALKLGGINYDVPSGRRDGLVSIGDEVPQNLPGPTLSADELVTNFARKGLSVDEMVTLAGAHSIGVSHCSSFSNRLYSFSDTSTQDPSMDSSYAATLKTKCPAPPATYRPNNQTLFSSQSTKEIVLNNAYYGASWAEKFAQAMVRMGSIEVLTGSDGEIRKHCSFVN 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0985 303 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0985 303 PRINTS Plant peroxidase signature 142 157 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0985 303 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0985 303 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0985 303 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0985 303 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0985 303 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
Ssu2g0985 303 Gene3D - 33 167 - -
Ssu2g0985 303 Gene3D - 283 303 - -
Ssu2g0985 303 ProSiteProfiles Plant heme peroxidase family profile. 29 303 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g0985 303 PANTHER PEROXIDASE 25-RELATED 248 301 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0985 303 PANTHER PEROXIDASE 25-RELATED 19 243 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0985 303 Gene3D Peroxidase, domain 2 168 243 - -
Ssu2g0985 303 SUPERFAMILY Heme-dependent peroxidases 30 303 IPR010255 GO:0004601|GO:0006979|GO:0020037
Ssu2g0985 303 Pfam Peroxidase 46 269 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g0985 303 Gene3D Peroxidase, domain 2 248 282 - -
Ssu2g0985 303 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
Ssu2g0985 303 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g0985 303 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g0985 303 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g0985 303 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g0985 303 CDD secretory_peroxidase 31 302 IPR033905 GO:0004601|GO:0042744
Ssu2g0985 303 PANTHER PEROXIDASE 248 301 - -
Ssu2g0985 303 PANTHER PEROXIDASE 19 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0985 Ssu-Chr2 47290392 47291494 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0985 15 303 Peroxidase AT4G11290 45.342 2.60e-86 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0985 K00430 - gmx:100786791 454.521