Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0984 ATGGATATTAATACTCCACGCTTGCTTCGGACGGTTTCCAGCTTGGTTCTGATTCTAAGTGTTTCATCATTGGCCTCAGCGTCTCTGAAAGTGGGTTTCTATTGTTCCACATGTCCATCTGCCGAGGCAATAGTGAGAAGCACAGTAAACAAAGCAATTTCCGACAACCCAGGCATAGCTGCTGGTCTCATTAGAATGCATTTCCATGATTGCTTTGTCAGGGGTTGCGATGGTTCTGTGTTACTAGCATCTACATCGGGTAACCCAGTAGCTGAGAGAGACAATTCCATCAACAATCCAAGCTTACGAGGATTCGAGGTGATTGAGGAGGCCAAGACCCAAATAGAAGCTGCATGTCCTCAAACAGTGTCGTGTGCAGACATTTTGGCATTCGCCGCACGAGACAGTGCTCTCAAAGTTGGTGGCATAAACTACGACGTACCATCAGGCCGCAGAGACGGTCTTGTCTCTATCGGTGATGAAGTGCCACAAAATCTTCCTGGACCAACCTTGAGTGCTGATGAACTTGTTACTAATTTTGCACGAAAGGGGTTGTCTGTAGATGAAATGGTGACACTTTCAGGAGCACATTCAATAGGTGTGTCACATTGCTCCTCCTTCTCAAAGCGCTTATACTCTTTCAGTGACACATCCACACAAGACCCCTCAATGGACCCTTCATATGCTGCAACGTTGAAAACCAAGTGTCCTGTACCACCCGCCACCACAGACCCAACAGTTCCTCTTGAGCCTTCCACCCCTATTCGTTTGGACAACAAATACTACGGGGGATTGATCAGCCATCGTGGTTTGTTGACATCAGATCAGACGCTGTTCAGCAGTCAGTCCACAAAGGAAATTGTTCTAAATAATGCATACTATGGTGCAAGTTGGGCTGAGAAGTTTGCCCAGGCAATGGTGCGCATGGATTCCATAGAAGTGCTTACTGGCTCCGATGGTGAGATCAGGAAGCACTGCAgctttgttaattaa 993 0.4663 MDINTPRLLRTVSSLVLILSVSSLASASLKVGFYCSTCPSAEAIVRSTVNKAISDNPGIAAGLIRMHFHDCFVRGCDGSVLLASTSGNPVAERDNSINNPSLRGFEVIEEAKTQIEAACPQTVSCADILAFAARDSALKVGGINYDVPSGRRDGLVSIGDEVPQNLPGPTLSADELVTNFARKGLSVDEMVTLSGAHSIGVSHCSSFSKRLYSFSDTSTQDPSMDPSYAATLKTKCPVPPATTDPTVPLEPSTPIRLDNKYYGGLISHRGLLTSDQTLFSSQSTKEIVLNNAYYGASWAEKFAQAMVRMDSIEVLTGSDGEIRKHCSFVN 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0984 330 ProSitePatterns Peroxidases active site signature. 60 71 IPR019794 GO:0004601
Ssu2g0984 330 PANTHER PEROXIDASE 20 328 - -
Ssu2g0984 330 ProSiteProfiles Plant heme peroxidase family profile. 28 330 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g0984 330 Pfam Peroxidase 45 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g0984 330 CDD secretory_peroxidase 30 329 IPR033905 GO:0004601|GO:0042744
Ssu2g0984 330 Gene3D Peroxidase, domain 2 167 309 - -
Ssu2g0984 330 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Ssu2g0984 330 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g0984 330 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g0984 330 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g0984 330 PRINTS Haem peroxidase superfamily signature 250 265 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g0984 330 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g0984 330 SUPERFAMILY Heme-dependent peroxidases 29 330 IPR010255 GO:0004601|GO:0006979|GO:0020037
Ssu2g0984 330 PANTHER PEROXIDASE 25-RELATED 20 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0984 330 PRINTS Plant peroxidase signature 304 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0984 330 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0984 330 PRINTS Plant peroxidase signature 248 263 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0984 330 PRINTS Plant peroxidase signature 264 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0984 330 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0984 330 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0984 330 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0984 330 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0984 330 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0984 330 Gene3D - 32 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0984 Ssu-Chr2 47274820 47275918 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0984 14 330 Peroxidase AT4G11290 45.201 5.02e-93 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0984 K00430 - gmx:100786791 519.235