Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0982 atgatttgtgGTCAGATTGGATCTTACACATGTCCATCTGCTGAGGCAATAGTGAGAAGCACAGTAGAAAAAGCAATTTCTGCCAACCCAGGCATAGCTGCTGGTCTCATTAGAATGCATTTCCATGATTGCTTTGTGAGGGGTTGTGATGGTTCTGTGCTGCTAGCATCTATTCCGGGTAATCCAATAGCTGAAAGAGACAATTTCGTTAACAACCCAAGTTTACGTGGGTTCGAGGTGATCGAGGAGGCCAAGACCCTGTTAGAGGCTGCATGTCCTCAAACCGTATCGTGTGCAGACATTTTGGCATTCGCAGCACGAGACTGTGCTCTCAAAGTTGGTGGCATAAACTACGAGGTACCATCAGGACGCAGAGACGGTCTTGTCTCTATCGGTGATGAAGTGCCACAAAATCTTCCTGGACCAACCTTGAGTGCTGATGAACTTGTTACTAATTTTGCACGAAAGGGGTTGTCGGTAGATGAAATGGTGACACTTTCAGGAGCACATTCAATAGGTGTGTCACATTGCTCCTCCTTCTCAAAGCGCTTATACTCTTTCAGTGACACATCCACACAAGACCCCTCAATGGACCCTTCATATGCTGCAACGTTGAAAACCAAGTGTCCTGCACCACCCGCCACCACAGACCCAACAGTTCCTCTTGAGCCTTCCACTCCTATTCGTTTGGACAACAAATACTATGAGGGATTGATCAACCACCGTGGCTTGTTGACATCAGAAAGTATCCATTCTGAAATTATAACATCGACCTTTTCATTGATTTCAACTTCCTCAAGTCGTCCGTGCAATACCATGATAACGTTTGAAAGATTATTATCTGTAACAACACTTTTCGCCTTCAGGGCAATGCTTCAACTGCATACACCCGCTTTGCACCAGCCCGAGCACAAAATATAG 921 0.4528 MICGQIGSYTCPSAEAIVRSTVEKAISANPGIAAGLIRMHFHDCFVRGCDGSVLLASIPGNPIAERDNFVNNPSLRGFEVIEEAKTLLEAACPQTVSCADILAFAARDCALKVGGINYEVPSGRRDGLVSIGDEVPQNLPGPTLSADELVTNFARKGLSVDEMVTLSGAHSIGVSHCSSFSKRLYSFSDTSTQDPSMDPSYAATLKTKCPAPPATTDPTVPLEPSTPIRLDNKYYEGLINHRGLLTSESIHSEIITSTFSLISTSSSRPCNTMITFERLLSVTTLFAFRAMLQLHTPALHQPEHKI 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0982 306 Gene3D - 9 139 - -
Ssu2g0982 306 PRINTS Plant peroxidase signature 76 89 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0982 306 PRINTS Plant peroxidase signature 11 30 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0982 306 PRINTS Plant peroxidase signature 114 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0982 306 PRINTS Plant peroxidase signature 221 236 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0982 306 PRINTS Plant peroxidase signature 95 105 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0982 306 PRINTS Plant peroxidase signature 161 173 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0982 306 PRINTS Plant peroxidase signature 35 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0982 306 PRINTS Plant peroxidase signature 237 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0982 306 SUPERFAMILY Heme-dependent peroxidases 7 248 IPR010255 GO:0004601|GO:0006979|GO:0020037
Ssu2g0982 306 ProSitePatterns Peroxidases active site signature. 33 44 IPR019794 GO:0004601
Ssu2g0982 306 ProSiteProfiles Plant heme peroxidase family profile. 10 249 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g0982 306 Pfam Peroxidase 18 248 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g0982 306 PANTHER PEROXIDASE 25-RELATED 6 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0982 306 Gene3D Peroxidase, domain 2 140 249 - -
Ssu2g0982 306 CDD secretory_peroxidase 8 247 IPR033905 GO:0004601|GO:0042744
Ssu2g0982 306 ProSitePatterns Peroxidases proximal heme-ligand signature. 162 172 IPR019793 -
Ssu2g0982 306 PRINTS Haem peroxidase superfamily signature 96 113 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g0982 306 PRINTS Haem peroxidase superfamily signature 162 177 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g0982 306 PRINTS Haem peroxidase superfamily signature 114 126 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g0982 306 PRINTS Haem peroxidase superfamily signature 223 238 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g0982 306 PRINTS Haem peroxidase superfamily signature 33 47 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g0982 306 PANTHER PEROXIDASE 6 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0982 Ssu-Chr2 47215366 47217953 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0982 10 249 Peroxidase AT1G05260 50.207 4.06e-76 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0982 K00430 - gmx:100786791 397.897